RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 OR2W1Q9Y3N9 320 aa7.49□□□□□ -1.21
SCFD1-220ENST00000556486 A0A0J9YWU9 116 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 USP17L23D6RBM5 183 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 MPPED1O15442 326 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 GGCTO75223 188 aaKnown RBP7.48□□□□□ -1.21
SCFD1-220ENST00000556486 CRYGCP07315 174 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 FOLR2P14207 255 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 CD36P16671 472 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 EDN2P20800 178 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 MAS1LP35410 378 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 AQP4P55087 323 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 OR10A3P58181 314 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 EIF4EBP1Q13541 118 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-220ENST00000556486 ARFRP1Q13795 201 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 KCTD9Q7L273 389 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 ZNF367Q7RTV3 350 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 ZBTB8BQ8NAP8 495 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-220ENST00000556486 VSTM2AQ8TAG5 236 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 TMEM167AQ8TBQ9 72 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 MAFIPQ8WZ33 124 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 OR51E2Q9H255 320 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 MRPS7Q9Y2R9 242 aaKnown RBP7.48□□□□□ -1.21
SCFD1-220ENST00000556486 RBMX2Q9Y388 322 aaKnown RBP7.48□□□□□ -1.21
SCFD1-220ENST00000556486 PRELID3BQ9Y3B1 194 aa7.48□□□□□ -1.21
SCFD1-220ENST00000556486 RBM7Q9Y580 266 aaKnown RBP7.48□□□□□ -1.21
SCFD1-220ENST00000556486 TRDV1A0A1B0GX56 115 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 NUPR2A6NF83 97 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 OR11H12B2RN74 326 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 KBTBD11O94819 623 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 PRH1P02810 166 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 FGF2P09038 288 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 ZNF735P0CB33 412 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 CBLN1P23435 193 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 TALDO1P37837 337 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 MAP2K4P45985 399 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 BRWD1-AS2P59051 145 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 RPL30P62888 115 aaKnown RBP7.47□□□□□ -1.21
SCFD1-220ENST00000556486 MSMO1Q15800 293 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 GUCA2BQ16661 112 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 C10orf55Q5SWW7 151 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 HACD4Q5VWC8 232 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 CEMP1Q6PRD7 247 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-220ENST00000556486 NR2C2APQ86WQ0 139 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 PUSL1Q8N0Z8 303 aaKnown RBP7.47□□□□□ -1.21
SCFD1-220ENST00000556486 OR4S2Q8NH73 311 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 OR2A7Q96R45 310 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 HSD17B10Q99714 261 aaKnown RBP7.47□□□□□ -1.21
SCFD1-220ENST00000556486 OVOL2Q9BRP0 275 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 SLC2A9Q9NRM0 540 aa7.47□□□□□ -1.21
SCFD1-220ENST00000556486 A0A1B0GW64 132 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 TMEM213A2RRL7 107 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 E7EUB6 86 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 H0YIZ8 118 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 FCGR3BO75015 233 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 OR2J3O76001 311 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 SCGNO76038 276 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 CTRB1P17538 263 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 RAB3BP20337 219 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 MYL9P24844 172 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 FGF9P31371 208 aaPredicted RBP7.46□□□□□ -1.22
SCFD1-220ENST00000556486 CAMPP49913 170 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 CTRB2Q6GPI1 263 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 CNIH2Q6PI25 160 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 ZNF66Q6ZN08 573 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 DYNLRB2Q8TF09 96 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 AIFM2Q9BRQ8 373 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
SCFD1-220ENST00000556486 A0A075B6Q4 140 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 IGKV1D-13A0A0B4J2D9 117 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 PPP5D1E7EU14 171 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 RBFOX2O43251 390 aaKnown RBP eCLIP7.45□□□□□ -1.22
SCFD1-220ENST00000556486 DHFRP00374 187 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 C8orf88P0DMB2 117 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 IGKV1-13P0DP09 117 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 HIST1H1BP16401 226 aaKnown RBP7.45□□□□□ -1.22
SCFD1-220ENST00000556486 NFYAP23511 347 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-220ENST00000556486 PSMB6P28072 239 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 RPL27AP46776 148 aaKnown RBP7.45□□□□□ -1.22
SCFD1-220ENST00000556486 CDNFQ49AH0 187 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 OR4A47Q6IF82 309 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 TMEM61Q8N0U2 210 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 MARC2Q969Z3 335 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 DCUN1D5Q9BTE7 237 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 CCDC90BQ9GZT6 254 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 BET1LQ9NYM9 111 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 ANXA10Q9UJ72 324 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 ELF5Q9UKW6 265 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-220ENST00000556486 BLOC1S6Q9UL45 172 aa7.45□□□□□ -1.22
SCFD1-220ENST00000556486 PKHD1P08F94 4074 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 IGLV11-55A0A075B6I3 123 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 TRBV7-1A0A0A6YYK4 115 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 TRAV25A0A0B4J276 109 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 MRPS14O60783 128 aaKnown RBP7.44□□□□□ -1.22
SCFD1-220ENST00000556486 HRASP01112 189 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 HLA-AP01891 365 aaKnown RBP7.44□□□□□ -1.22
SCFD1-220ENST00000556486 ELLP55199 621 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-220ENST00000556486 RPL8P62917 257 aaKnown RBP7.44□□□□□ -1.22
SCFD1-220ENST00000556486 POU2AF1Q16633 256 aa7.44□□□□□ -1.22
SCFD1-220ENST00000556486 ANKRD55Q3KP44 614 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms