RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 DEFB124Q8NES8 71 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 NRN1Q9NPD7 142 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 TNFRSF19Q9NS68 423 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 INSIG2Q9Y5U4 225 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 DNAJC13O75165 2243 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 DNLZQ5SXM8 178 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 GFRALQ6UXV0 394 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 OR8B2Q96RD0 313 aa12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 PARD6GQ9BYG4 376 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 RNASE7Q9H1E1 156 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-207ENST00000556399 A6NDN8 102 aa12.58□□□□□ -0.39
ARHGEF40-207ENST00000556399 OR2J3O76001 311 aa12.58□□□□□ -0.39
ARHGEF40-207ENST00000556399 NUTF2P61970 127 aaKnown RBP12.58□□□□□ -0.39
ARHGEF40-207ENST00000556399 SLC25A34Q6PIV7 304 aa12.58□□□□□ -0.39
ARHGEF40-207ENST00000556399 LYPD6BQ8NI32 183 aa12.58□□□□□ -0.39
ARHGEF40-207ENST00000556399 KLK10O43240 276 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 PRSS1P07477 247 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 RELBQ01201 579 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 TMEM97Q5BJF2 176 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 C12orf54Q6X4T0 127 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 OR8B3Q8NGG8 313 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 NPIPB3Q92617 1050 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 DERL1Q9BUN8 251 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 IGHV3-72A0A0B4J1Y9 119 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 OR9G9P0C7N8 305 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 GATA2P23769 480 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 TCTAP57738 103 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 C20orf204Q6ZNR8 217 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 TMEM256Q8N2U0 113 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 C2orf88Q9BSF0 95 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 ESPL1Q14674 2120 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 BEND2Q8NDZ0 799 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 EAF1Q96JC9 268 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 LRRK1Q38SD2 2015 aa12.58□□□□□ -0.4
ARHGEF40-207ENST00000556399 RPL27AP46776 148 aaKnown RBP12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 RPL30P62888 115 aaKnown RBP12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 KRTCAP3Q53RY4 240 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 IGKV3D-15A0A087WSY6 115 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 GNG7O60262 68 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 BMPERQ8N8U9 685 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 CDX2Q99626 313 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 GP6Q9HCN6 339 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 PPIAL4EA0A075B759 164 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 IGKV1-6A0A0C4DH72 117 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 PPIAL4DF5H284 164 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 H3BTX0 84 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 CECR9P0C854 216 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 PPIAL4FP0DN26 164 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 PPIAL4AQ9Y536 164 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 FOXA3P55318 350 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 FOXL1Q12952 345 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 PET117Q6UWS5 81 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 LYPD6Q86Y78 171 aa12.57□□□□□ -0.4
ARHGEF40-207ENST00000556399 KIAA2026Q5HYC2 2103 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 SLC25A17O43808 307 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 IGHV1-2P23083 117 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 TIMP3P35625 211 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 C1orf194Q5T5A4 169 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 CDC42EP3Q9UKI2 254 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 TRBV6-6A0A0A6YYG2 114 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 K7ERU9 68 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 RPL24P83731 157 aaKnown RBP12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 LILRA1O75019 489 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 REG1AP05451 166 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 PAX9P55771 341 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 FAM157AC9JC47 383 aa12.56□□□□□ -0.4
ARHGEF40-207ENST00000556399 A6NNC1 897 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 NKX2-8O15522 239 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 CA7P43166 264 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 ATP5IP56385 69 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 EFNB3Q15768 340 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 TREML4Q6UXN2 200 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 CYYR1Q96J86 154 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 DUTP33316 252 aaKnown RBP12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 HBBP68871 147 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 ASCL5Q7RTU5 278 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 THYN1Q9P016 225 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 LAMTOR2Q9Y2Q5 125 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 RNF115Q9Y4L5 304 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 TRIOBPQ9H2D6 2365 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 AHRRA9YTQ3 701 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 B3GALT5-AS1P59052 145 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 TBR1Q16650 682 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 FAM201AQ5SY85 155 aa12.55□□□□□ -0.4
ARHGEF40-207ENST00000556399 PSPNO60542 156 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 STAG3L2P0CL84 134 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 STAG3L3P0CL85 134 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 MC5RP33032 325 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 WDR82Q6UXN9 313 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 M0R296 226 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 ORM1P02763 201 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms