RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PRAMEF5Q5TYX0 476 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 PRAMEF6Q5VXH4 476 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SLC35E4Q6ICL7 350 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SPINK14Q6IE38 97 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SSX9Q7RTT3 188 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 C17orf78Q8N4C9 275 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 DRAM1Q8N682 238 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 WDR31Q8NA23 367 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 NECAP1Q8NC96 275 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 OR1P1Q8NH06 330 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BHQ93079 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 TMEM18Q96B42 140 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 GMPPAQ96IJ6 420 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BNQ99877 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BMQ99879 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 FGF23Q9GZV9 251 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-241ENST00000556374 CXXC4Q9H2H0 198 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 PARLQ9H300 379 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SDF2L1Q9HCN8 221 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HSPB7Q9UBY9 170 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 WIPI2Q9Y4P8 454 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 A0A087X0M5 115 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 A0A1B0GX30 115 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 A0A1W2PPQ1 181 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 ODAMA1E959 279 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 FAM90A9PA6NNJ1 464 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 A8MXE2 369 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 IQCF6A8MYZ5 107 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 C11orf94C9JXX5 98 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 DVL1O14640 695 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 RHBDL1O75783 438 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 NEURL1O76050 574 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 S1PR2O95136 353 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 TNFSF15O95150 251 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 KRASP01116 189 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 CD99P14209 185 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H1BP16401 226 aaKnown RBP3.64□□□□□ -1.83
ATXN3-241ENST00000556374 GNLYP22749 145 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 G6PCP35575 357 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 WNT5AP41221 380 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 RAB4BP61018 213 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 ERVS71-1P61550 626 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 PMS2P11Q13670 270 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF146Q15072 292 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 USF2Q15853 346 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-241ENST00000556374 C3AR1Q16581 482 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 LBHQ53QV2 105 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-241ENST00000556374 C9orf152Q5JTZ5 239 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 DCAF10Q5QP82 559 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 Q6P435 159 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 TMEM14EPQ6UXP3 125 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 SPNS3Q6ZMD2 512 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 VASH2Q86V25 355 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 C1orf174Q8IYL3 243 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 FGFRL1Q8N441 504 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 SCCPDHQ8NBX0 429 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 OR2T10Q8NGZ9 312 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 OR4A16Q8NH70 328 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 SLC25A40Q8TBP6 338 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 CA5BP1Q8WTZ4 195 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 CORO2AQ92828 525 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 BCL2L2Q92843 193 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-241ENST00000556374 NOL4LQ96MY1 436 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-241ENST00000556374 UHRF2Q96PU4 802 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 OR4C12Q96R67 309 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 PRR25Q96S07 402 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 SSX3Q99909 188 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 TXNDC17Q9BRA2 123 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 CHODLQ9H9P2 273 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 TUBG2Q9NRH3 451 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 CLN8Q9UBY8 286 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 TINAGQ9UJW2 476 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 RFNGQ9Y644 331 aa3.64□□□□□ -1.83
ATXN3-241ENST00000556374 TRAV39A0A0B4J263 110 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 A0A1W2PR80 420 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF705GA8MUZ8 300 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-241ENST00000556374 C12orf77C9JDV5 145 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 CDIPTO14735 213 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 PAGE4O60829 102 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 CXorf1O96002 111 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 GCGP01275 180 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 IGKV1-39P01597 117 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 HBZP02008 142 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 IGKV1D-39P04432 117 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 SOD3P08294 240 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 DDTP30046 118 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 RAB7AP51149 207 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 CNN1P51911 297 aaKnown RBP3.63□□□□□ -1.83
ATXN3-241ENST00000556374 RPL23P62829 140 aaKnown RBP3.63□□□□□ -1.83
ATXN3-241ENST00000556374 LCN2P80188 198 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 PMP22Q01453 160 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 CFHR3Q02985 330 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 TFF3Q07654 80 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 EDDM3AQ14507 147 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF726P1Q15940 193 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 SSX2Q16385 188 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 IQCJQ1A5X6 159 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 IZUMO4Q1ZYL8 232 aa3.63□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF718Q3SXZ3 478 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms