RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 CDH23Q9H251 3354 aa1.74□□□□□ -2.13
CDKN3-210ENST00000556305 TMEM131LA2VDJ0 1609 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 NF1P21359 2839 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 KIAA0586Q9BVV6 1533 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 A0A0J9YW62 118 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 M0R036 132 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 REG1AP05451 166 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 CALB1P05937 261 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 PEBP1P30086 187 aaKnown RBP1.73□□□□□ -2.13
CDKN3-210ENST00000556305 CCR7P32248 378 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 CCR2P41597 374 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 RPL30P62888 115 aaKnown RBP1.73□□□□□ -2.13
CDKN3-210ENST00000556305 HES1Q14469 280 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 C10orf126Q8N4M7 172 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 PACRGLQ8N7B6 248 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 OR8B12Q8NGG6 310 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 OPTNQ96CV9 577 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 SPZ1Q9BXG8 430 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 CXorf21Q9HAI6 301 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 PARVGQ9HBI0 331 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 RSL24D1Q9UHA3 163 aaKnown RBP1.73□□□□□ -2.13
CDKN3-210ENST00000556305 ANAPC10Q9UM13 185 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 PRELID1Q9Y255 219 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 ANGPT4Q9Y264 503 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 COL4A2P08572 1712 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 IFT140Q96RY7 1462 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 FRYQ5TBA9 3013 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 TET3O43151 1660 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 TENM4Q6N022 2769 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 PTPRZ1P23471 2315 aaPredicted RBP1.73□□□□□ -2.13
CDKN3-210ENST00000556305 SLX4Q8IY92 1834 aa1.73□□□□□ -2.13
CDKN3-210ENST00000556305 EVC2Q86UK5 1308 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 RYR3Q15413 4870 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 SMG1Q96Q15 3661 aaKnown RBP1.72□□□□□ -2.13
CDKN3-210ENST00000556305 PLXNA3P51805 1871 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 ROBO1Q9Y6N7 1651 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 TCOF1Q13428 1488 aaKnown RBP1.72□□□□□ -2.13
CDKN3-210ENST00000556305 TMEM269A0A1B0GVZ9 245 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 ZNF860A6NHJ4 632 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 RFPL4AA6NLU0 287 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 RFPL4AL1F8VTS6 287 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 KCNK1O00180 336 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 NIPSNAP2O75323 286 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 AHSA1O95433 338 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 KCNE1P15382 129 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 MARCKSL1P49006 195 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 IDH3GP51553 393 aaPredicted RBP1.72□□□□□ -2.13
CDKN3-210ENST00000556305 KRTAP12-1P59990 96 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 TPI1P60174 286 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 NAA20P61599 178 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 HIST1H4AP62805 103 aaKnown RBP1.72□□□□□ -2.13
CDKN3-210ENST00000556305 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 SAPCD1Q5SSQ6 148 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 ZNF550Q7Z398 422 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 UMODL1-AS1Q8N2C9 162 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 GPR32P1Q8NGA4 272 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 RNASE6Q93091 150 aaKnown RBP1.72□□□□□ -2.13
CDKN3-210ENST00000556305 PTH2Q96A98 100 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 C8orf4Q9NR00 106 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 CEP295Q9C0D2 2601 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 CREBBPQ92793 2442 aa1.72□□□□□ -2.13
CDKN3-210ENST00000556305 NAV1Q8NEY1 1877 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 ZNF532Q9HCE3 1301 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 CSMD1Q96PZ7 3565 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 PXDNLA1KZ92 1463 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 CHD5Q8TDI0 1954 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 TGOLN2O43493 480 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 RAB13P51153 203 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 TCL1AP56279 114 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 PCOTHQ58A44 107 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 C9orf64Q5T6V5 341 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 TIMM21Q9BVV7 248 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 TTTY13Q9BZ97 58 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 TENM1Q9UKZ4 2725 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 DSCAMO60469 2012 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 ABCC12Q96J65 1359 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 ADGRB3O60242 1522 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 FAM135AQ9P2D6 1515 aa1.71□□□□□ -2.14
CDKN3-210ENST00000556305 BIRC6Q9NR09 4857 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 LAMB2P55268 1798 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 ATG2BQ96BY7 2078 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 TMSB15BA0A087X1C1 80 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 PHLPP1O60346 1717 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 COL5A3P25940 1745 aaPredicted RBP1.7□□□□□ -2.14
CDKN3-210ENST00000556305 CSN1S1P47710 185 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 UBE2IP63279 158 aaKnown RBP1.7□□□□□ -2.14
CDKN3-210ENST00000556305 HIST3H3Q16695 136 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 COQ5Q5HYK3 327 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 HIST2H3PS2Q5TEC6 136 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 GLT8D1Q68CQ7 371 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 TMEM42Q69YG0 159 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 LRRC28Q86X40 367 aaPredicted RBP1.7□□□□□ -2.14
CDKN3-210ENST00000556305 MNS1Q8NEH6 495 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 OR51T1Q8NGJ9 327 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 ASB17Q8WXJ9 295 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 DOK5Q9P104 306 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 HYDINQ4G0P3 5121 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 MUC2Q02817 5179 aa1.7□□□□□ -2.14
CDKN3-210ENST00000556305 DNAH14Q0VDD8 3507 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms