RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 HNF4GQ14541 408 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 ZNF345Q14585 488 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 SPINK9Q5DT21 86 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 SPANXN5Q5MJ07 72 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 CYB5R2Q6BCY4 276 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 CLEC9AQ6UXN8 241 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 PUSL1Q8N0Z8 303 aaKnown RBP5.08□□□□□ -1.6
HIF1A-208ENST00000556237 DYNAPQ8N1N2 210 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 OR2C3Q8N628 320 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 TMEM252Q8N6L7 170 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 TEX45Q8NA69 505 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 OR52E5Q8NH55 327 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 OR4A5Q8NH83 315 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 VSTM2AQ8TAG5 236 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 C17orf50Q8WW18 174 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 BSCL2Q96G97 398 aaPredicted RBP5.08□□□□□ -1.6
HIF1A-208ENST00000556237 CLCC1Q96S66 551 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 TSNAXQ99598 290 aaKnown RBP5.08□□□□□ -1.6
HIF1A-208ENST00000556237 RNF5Q99942 180 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 ARPC5LQ9BPX5 153 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 HINT2Q9BX68 163 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 SMIM3Q9BZL3 60 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 ENY2Q9NPA8 101 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 BET1LQ9NYM9 111 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 HSPB7Q9UBY9 170 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 CACFD1Q9UGQ2 172 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 NUP50Q9UKX7 468 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 PRNDQ9UKY0 176 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 PAIP2BQ9ULR5 123 aaKnown RBP5.08□□□□□ -1.6
HIF1A-208ENST00000556237 OR51B2Q9Y5P1 312 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 TNFRSF18Q9Y5U5 241 aa5.08□□□□□ -1.6
HIF1A-208ENST00000556237 KALRNO60229 2985 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 IGSF23A1L1A6 192 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 C15orf61A6NNL5 157 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 B5MCH6 92 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 H3BP45 60 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 TAAR5O14804 337 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 BCL2L11O43521 198 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 SLC25A17O43808 307 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 VENTXO95231 258 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 MOSP00540 346 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 IGKV1D-33P01593 117 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 IGKV1-33P01594 117 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 IGLV2-23P01705 113 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 OPN1MWP04001 364 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 CRYGBP07316 175 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 SNRNP70P08621 437 aaKnown RBP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 OPN1MW2P0DN77 364 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 OPN1MW3P0DN78 364 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 IGHV4-31P0DP07 118 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 CNTFRP26992 372 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 BRS3P32247 399 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 SAA4P35542 130 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 TAS2R30P59541 319 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 EWSR1Q01844 656 aaKnown RBP eCLIP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 PSG5Q15238 335 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 TMEM249Q2WGJ8 235 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 RUSC1-AS1Q66K80 236 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 SLC51BQ86UW2 128 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 ZNF429Q86V71 674 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 OR2T10Q8NGZ9 312 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 TMEM167AQ8TBQ9 72 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 DTD1Q8TEA8 209 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 RAB24Q969Q5 203 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 CIB3Q96Q77 187 aaPredicted RBP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 ZNF471Q9BX82 626 aaPredicted RBP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 COMMD5Q9GZQ3 224 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 HIPK2Q9H2X6 1198 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 FBXL15Q9H469 300 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 HEYLQ9NQ87 328 aaPredicted RBP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 LYRM2Q9NU23 88 aaPredicted RBP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 METTL1Q9UBP6 276 aaKnown RBP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 ITGB1BP2Q9UKP3 347 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 TCF19Q9Y242 345 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 FOXA2Q9Y261 457 aaPredicted RBP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 FAM96BQ9Y3D0 163 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 STRAPQ9Y3F4 350 aaKnown RBP5.07□□□□□ -1.6
HIF1A-208ENST00000556237 DMRT1Q9Y5R6 373 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 WSB1Q9Y6I7 421 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 ADGRG4Q8IZF6 3080 aa5.07□□□□□ -1.6
HIF1A-208ENST00000556237 SPG11Q96JI7 2443 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 TRAV40A0A0B4J280 105 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 J3QLI3 93 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 RRHO14718 337 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 CST7O76096 145 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 ACTL6BO94805 426 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 CFDP00746 253 aaPredicted RBP5.06□□□□□ -1.6
HIF1A-208ENST00000556237 IFNA10P01566 189 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 FGF2P09038 288 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 METTL15P1P0C7V9 234 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 FAM106CPP0CH98 169 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 IGHV4-38-2P0DP08 117 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 TMEM11P17152 192 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 VDAC2P45880 294 aaPredicted RBP5.06□□□□□ -1.6
HIF1A-208ENST00000556237 HOXA1P49639 335 aaPredicted RBP5.06□□□□□ -1.6
HIF1A-208ENST00000556237 DYNLT3P51808 116 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 F2RL1P55085 397 aa5.06□□□□□ -1.6
HIF1A-208ENST00000556237 RPL8P62917 257 aaKnown RBP5.06□□□□□ -1.6
HIF1A-208ENST00000556237 RPP30P78346 268 aaKnown RBP5.06□□□□□ -1.6
HIF1A-208ENST00000556237 ERHP84090 104 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms