RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 EFNB3Q15768 340 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 CT45A1Q5HYN5 189 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 TMEM144Q7Z5S9 345 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 OR10G8Q8NGN5 311 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 CT45A3Q8NHU0 189 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 LEAP2Q969E1 77 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 PLEKHA3Q9HB20 300 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 AURKAIP1Q9NWT8 199 aaPredicted RBP5.76□□□□□ -1.49
TDP1-213ENST00000555880 OR51B2Q9Y5P1 312 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 CADP27708 2225 aa5.76□□□□□ -1.49
TDP1-213ENST00000555880 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 ADARB2-AS1A8MUL3 147 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 MKRN2OSH3BPM6 223 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 TM4SF5O14894 197 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 CA2P00918 260 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 TIMP3P35625 211 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 GPX4P36969 197 aaPredicted RBP5.75□□□□□ -1.49
TDP1-213ENST00000555880 ATP5IP56385 69 aaPredicted RBP5.75□□□□□ -1.49
TDP1-213ENST00000555880 RPL31P62899 125 aaKnown RBP5.75□□□□□ -1.49
TDP1-213ENST00000555880 IQCJQ1A5X6 159 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 MSMPQ1L6U9 139 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 C17orf58Q2M2W7 97 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 GBGT1Q8N5D6 347 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 FAM222BQ8WU58 562 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 FKBP11Q9NYL4 201 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 IDI2-AS1Q9NZ38 188 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 IL19Q9UHD0 177 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 SLC45A2Q9UMX9 530 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 ZNF257Q9Y2Q1 563 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 ARL2-SNX15V9GYD0 113 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 PLCE1Q9P212 2302 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 IGLV3-9A0A075B6K5 115 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 PGPEP1LA6NFU8 196 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 NKX6-3A6NJ46 265 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 C9JCJ5 164 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 J3QR06 171 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 CGB3P0DN86 165 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 CGB7P0DN87 165 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 HNF1AP20823 631 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 GNG10P50151 68 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 RPL15P61313 204 aaKnown RBP5.75□□□□□ -1.49
TDP1-213ENST00000555880 ZNF90Q03938 601 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 POU2AF1Q16633 256 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 LBHQ53QV2 105 aaPredicted RBP5.75□□□□□ -1.49
TDP1-213ENST00000555880 C1orf185Q5T7R7 199 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 STUMQ69YW2 141 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 TEX38Q6PEX7 206 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 ZNF114Q8NC26 417 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 OR4P4Q8NGL7 312 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 C11orf52Q96A22 123 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 SLC35E1Q96K37 410 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 SEPSECSQ9HD40 501 aaKnown RBP5.75□□□□□ -1.49
TDP1-213ENST00000555880 GCM1Q9NP62 436 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 TMEM167BQ9NRX6 74 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 ELOVL5Q9NYP7 299 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 SLC25A10Q9UBX3 287 aaPredicted RBP5.75□□□□□ -1.49
TDP1-213ENST00000555880 YTHDF2Q9Y5A9 579 aaKnown RBP5.75□□□□□ -1.49
TDP1-213ENST00000555880 LY96Q9Y6Y9 160 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 DSCAMO60469 2012 aa5.75□□□□□ -1.49
TDP1-213ENST00000555880 RAI1Q7Z5J4 1906 aaPredicted RBP5.74□□□□□ -1.49
TDP1-213ENST00000555880 EP300Q09472 2414 aaPredicted RBP5.74□□□□□ -1.49
TDP1-213ENST00000555880 TRBV20OR9-2A0A075B6H5 130 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 hADV38S2A0JD32 116 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 DLL1O00548 723 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 CEACAM4O75871 244 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 SELLP14151 372 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 AREGP15514 252 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 WT1P19544 449 aaPredicted RBP5.74□□□□□ -1.49
TDP1-213ENST00000555880 GNG4P50150 75 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 TAS2R45P59539 299 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 PRCDQ00LT1 54 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 RPEL1Q2QD12 228 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 SPRNQ5BIV9 151 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 ZNF474Q6S9Z5 364 aaPredicted RBP5.74□□□□□ -1.49
TDP1-213ENST00000555880 SEM1Q6ZVN7 128 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 DEFB108BQ8NET1 73 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 OCC1Q8TAD7 63 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 NEUROG1Q92886 237 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 C19orf24Q9BVV8 132 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 GAL3ST2Q9H3Q3 398 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 SLC35D1Q9NTN3 355 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 TECRQ9NZ01 308 aaKnown RBP5.74□□□□□ -1.49
TDP1-213ENST00000555880 IL36BQ9NZH7 164 aa5.74□□□□□ -1.49
TDP1-213ENST00000555880 YLPM1P49750 1951 aaKnown RBP5.74□□□□□ -1.49
TDP1-213ENST00000555880 CNOT1A5YKK6 2376 aaKnown RBP5.73□□□□□ -1.49
TDP1-213ENST00000555880 NBEAQ8NFP9 2946 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 UPK2O00526 184 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 ACTL6BO94805 426 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 SCGB1D1O95968 90 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 IGHV1-46P01743 117 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 CRYABP02511 175 aaKnown RBP5.73□□□□□ -1.49
TDP1-213ENST00000555880 APOA2P02652 100 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 IGFBP2P18065 325 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 ERVFC1-1P60608 527 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 YPEL3P61236 119 aaPredicted RBP5.73□□□□□ -1.49
TDP1-213ENST00000555880 PSG5Q15238 335 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 FAM201AQ5SY85 155 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 SPATA31B1PQ5VZV4 182 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 SLC25A48Q6ZT89 311 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms