RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 KIF15Q9NS87 1388 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 CITO14578 2027 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 TRAV1-1A0A0B4J248 108 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 F5H768 121 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 GOLGA8MH3BSY2 632 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 BIRC5O15392 142 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 TOX3O15405 576 aaPredicted RBP0.2□□□□□ -2.38
SRP54-207ENST00000555535 FADS1O60427 444 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 IGHV3-7P01780 117 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 TYMSP04818 313 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 CRYGAP11844 174 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 RNASE3P12724 160 aaKnown RBP0.2□□□□□ -2.38
SRP54-207ENST00000555535 SPI1P17947 270 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 CCL1P22362 96 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 CDC34P49427 236 aaPredicted RBP0.2□□□□□ -2.38
SRP54-207ENST00000555535 FKBP1AP62942 108 aaKnown RBP0.2□□□□□ -2.38
SRP54-207ENST00000555535 UBE2IP63279 158 aaKnown RBP0.2□□□□□ -2.38
SRP54-207ENST00000555535 FABP9Q0Z7S8 132 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 EBPQ15125 230 aaKnown RBP0.2□□□□□ -2.38
SRP54-207ENST00000555535 KISS1Q15726 138 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 TNFAIP8L3Q5GJ75 292 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 C1orf194Q5T5A4 169 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 DNM1P34Q6PK57 102 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 C5orf46Q6UWT4 87 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 C12orf29Q8N999 325 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 OR51D1Q8NGF3 324 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 DNAJC9Q8WXX5 260 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 OPTNQ96CV9 577 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 DHRS9Q9BPW9 319 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 TMEM147Q9BVK8 224 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 YIPF3Q9GZM5 350 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 FAM96AQ9H5X1 160 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 KLK9Q9UKQ9 250 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 MED12Q93074 2177 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 PLXNA4Q9HCM2 1894 aa0.2□□□□□ -2.38
SRP54-207ENST00000555535 MYO18AQ92614 2054 aaKnown RBP0.2□□□□□ -2.38
SRP54-207ENST00000555535 PTPRFP10586 1907 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 A0A087WX48 190 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 GOLGA6L10A6NI86 522 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 OR4C45A6NMZ5 311 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 YKT6O15498 198 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 COCHO43405 550 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 HPGDSO60760 199 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 OR5F1O95221 314 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 DNAL4O96015 105 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 SHBGP04278 402 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 ASAH2BP0C7U1 165 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 METTL15P1P0C7V9 234 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 KCNE1P15382 129 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 CASQ1P31415 396 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 KCNJ8Q15842 424 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 RNASE10Q5GAN6 216 aaKnown RBP0.19□□□□□ -2.38
SRP54-207ENST00000555535 COQ5Q5HYK3 327 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 FAM78BQ5VT40 261 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 SDHAF4Q5VUM1 108 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 CST9Q5W186 159 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 LCN15Q6UWW0 184 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 FAM19A5Q7Z5A7 132 aaPredicted RBP0.19□□□□□ -2.38
SRP54-207ENST00000555535 CLVS1Q8IUQ0 354 aaPredicted RBP0.19□□□□□ -2.38
SRP54-207ENST00000555535 CD302Q8IX05 232 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 C1orf158Q8N1D5 194 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 OR2T4Q8NH00 348 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 KLK6Q92876 244 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 DIRAS2Q96HU8 199 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 KCTD7Q96MP8 289 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 HES4Q9HCC6 221 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 IL36BQ9NZH7 164 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 CNTRLQ7Z7A1 2325 aa0.19□□□□□ -2.38
SRP54-207ENST00000555535 TRBV6-8A0A0A6YYG3 113 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 TRAV3A0A0B4J244 114 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 IGHV1-69-2A0A0G2JMI3 117 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 C1orf232A0A0U1RR37 186 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 FUOMA2VDF0 154 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 FABP12A6NFH5 140 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 EVPLLA8MZ36 301 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 PFDN6O15212 129 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 NOS1APO75052 506 aaPredicted RBP0.18□□□□□ -2.38
SRP54-207ENST00000555535 YEATS4O95619 227 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 HLA-DRAP01903 254 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 SRP19P09132 144 aaKnown RBP0.18□□□□□ -2.38
SRP54-207ENST00000555535 FAM228BP0C875 321 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 SPTBP11277 2137 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 RPS12P25398 132 aaKnown RBP0.18□□□□□ -2.38
SRP54-207ENST00000555535 MAP3K7CLP57077 242 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 DEFA1P59665 94 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 UBE2G2P60604 165 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 RAB4BP61018 213 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 SKP1P63208 163 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 RPL18Q07020 188 aaKnown RBP0.18□□□□□ -2.38
SRP54-207ENST00000555535 LRRC26Q2I0M4 334 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 C1orf195Q5TG92 126 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 AADACL3Q5VUY0 350 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 KRTAP19-3Q7Z4W3 81 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 SBSPONQ8IVN8 264 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 LINC00311Q8N616 119 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 TMEM161BQ8NDZ6 487 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 OR7G1Q8NGA0 311 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 TMEM106AQ96A25 262 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 SMIM19Q96E16 107 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 C19orf60Q96EN9 201 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms