RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 EFCAB11Q9BUY7 163 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 RSPO3Q9BXY4 272 aaPredicted RBP3.14□□□□□ -1.91
VRK1-203ENST00000555067 VCXQ9H320 206 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 ATG2BQ96BY7 2078 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 ARID1AO14497 2285 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 SCN4AP35499 1836 aa3.14□□□□□ -1.91
VRK1-203ENST00000555067 TRBV19A0A075B6N1 114 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 TMEM269A0A1B0GVZ9 245 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 AIPO00170 330 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 BANF1O75531 89 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 MED6O75586 246 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 PIAS1O75925 651 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 S100A7P31151 101 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 GABRA2P47869 451 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 FLI1Q01543 452 aaPredicted RBP3.13□□□□□ -1.91
VRK1-203ENST00000555067 TMEM69Q5SWH9 247 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 TOMM20LQ6UXN7 152 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 FNDC9Q8TBE3 224 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 FOPNLQ96NB1 174 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 TVP23BQ9NYZ1 205 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 GSKIPQ9P0R6 139 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 FUT9Q9Y231 359 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 AMMECR1Q9Y4X0 333 aaPredicted RBP3.13□□□□□ -1.91
VRK1-203ENST00000555067 CEP152O94986 1710 aa3.13□□□□□ -1.91
VRK1-203ENST00000555067 KIF24Q5T7B8 1368 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 TUBGCP6Q96RT7 1819 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 J3QRK9 145 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 KPNA4O00629 521 aaPredicted RBP3.12□□□□□ -1.91
VRK1-203ENST00000555067 IFNA7P01567 189 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 SLC25A16P16260 332 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST1H2BOP23527 126 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 CRHBPP24387 322 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST1H2BBP33778 126 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 RPL27AP46776 148 aaKnown RBP3.12□□□□□ -1.91
VRK1-203ENST00000555067 PIGPP57054 158 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST1H2BDP58876 126 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST1H2BCP62807 126 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 BAMBIQ13145 260 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST2H2BEQ16778 126 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 LTC4SQ16873 150 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.12□□□□□ -1.91
VRK1-203ENST00000555067 SDIM1Q6ZPB5 146 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 APCDD1LQ8NCL9 501 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 KLF14Q8TD94 323 aaPredicted RBP3.12□□□□□ -1.91
VRK1-203ENST00000555067 H1FXQ92522 213 aaKnown RBP3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST1H2BHQ93079 126 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 PLEKHB2Q96CS7 222 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST1H2BNQ99877 126 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 HIST1H2BMQ99879 126 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 TMEM70Q9BUB7 260 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 TTTY13Q9BZ97 58 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 C16orf95Q9H693 158 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 THADAQ6YHU6 1953 aa3.12□□□□□ -1.91
VRK1-203ENST00000555067 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.11□□□□□ -1.91
VRK1-203ENST00000555067 ZNF638Q14966 1978 aaKnown RBP3.11□□□□□ -1.91
VRK1-203ENST00000555067 TRAV41A0A0B4J266 112 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 A0A1B0GW54 56 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 C7orf66A4D0T2 115 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 C19orf71A6NCJ1 209 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 RIIAD1A6NNX1 92 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 E7EQ34 232 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 PFDN1O60925 122 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 LY6HO94772 140 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 OR10J4P0C629 311 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 ZNF286BP0CG31 522 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 RPS4Y1P22090 263 aaKnown RBP3.11□□□□□ -1.91
VRK1-203ENST00000555067 CSN1S1P47710 185 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 AADACL3Q5VUY0 350 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 Q6ZQT7 251 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 LYZL2Q7Z4W2 148 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 RPRMLQ8N4K4 120 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 OR13C4Q8NGS5 318 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 OR5J2Q8NH18 312 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 MALSU1Q96EH3 234 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 MGLLQ99685 303 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 SEC22CQ9BRL7 303 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 PBOV1Q9GZY1 135 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 IL36BQ9NZH7 164 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 ASB4Q9Y574 426 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 S4R3C0 116 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 REREQ9P2R6 1566 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 NID2Q14112 1375 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 TONSLQ96HA7 1378 aa3.11□□□□□ -1.91
VRK1-203ENST00000555067 COL18A1P39060 1754 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 KIF13BQ9NQT8 1826 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 ZNF98A6NK75 572 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 BET1O15155 118 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 NDUFB2O95178 105 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 SRIP30626 198 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 CA5AP35218 305 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 PSPHP78330 225 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 CCL20P78556 96 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 DHRS2Q13268 280 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 CNEP1R1Q8N9A8 125 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 BPIFB6Q8NFQ5 453 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 MED11Q9P086 117 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 OR52A1Q9UKL2 312 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 ZNF443Q9Y2A4 671 aaPredicted RBP3.1□□□□□ -1.91
VRK1-203ENST00000555067 ZNF835Q9Y2P0 537 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms