RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 HOXA4Q00056 320 aaPredicted RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 CIARTQ8N365 385 aaPredicted RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 RPRMLQ8N4K4 120 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 DUSP15Q9H1R2 295 aaPredicted RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 NXT2Q9NPJ8 142 aaKnown RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 F11RQ9Y624 299 aaKnown RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 A0A096LPE4 126 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 IGKV1-9A0A0C4DH69 117 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 hCG_38984A0A1B0GV85 526 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 A0A1W2PPZ6 126 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 GAGE12HA6NDE8 117 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 M0QZ24 198 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 TMEM50AO95807 157 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 CGAP01215 116 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 GPR6P46095 362 aaPredicted RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 LHX2P50458 406 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 RAB9AP51151 201 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 EMP1P54849 157 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 GFERP55789 205 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 PSG4Q00888 419 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 SLC25A48Q6ZT89 311 aaKnown RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 TPRX1Q8N7U7 411 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 ST6GALNAC3Q8NDV1 305 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 DLX4Q92988 240 aaPredicted RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 TNFRSF19Q9NS68 423 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 NHP2Q9NX24 153 aaKnown RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 NCOR1O75376 2440 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 NPIPB11E5RHQ5 1161 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 M0R3E3 92 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 SMAD7O15105 426 aaKnown RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 DPM2O94777 84 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 IGKV3-11P04433 115 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 SP9P0CG40 484 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 FOXA3P55318 350 aaPredicted RBP5.42□□□□□ -1.54
PCNX1-207ENST00000554691 TMEM196Q5HYL7 178 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 BVES-AS1Q5T3Y7 98 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 TMEM140Q9NV12 185 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 ZNF319Q9P2F9 582 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 KIF26BQ2KJY2 2108 aa5.42□□□□□ -1.54
PCNX1-207ENST00000554691 LCTP09848 1927 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 ZNF716A6NP11 495 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 SHISA8B8ZZ34 492 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 COX8AP10176 69 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 CSRP1P21291 193 aaKnown RBP5.41□□□□□ -1.54
PCNX1-207ENST00000554691 CDKN1AP38936 164 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 GFRA1P56159 465 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 FOXL2P58012 376 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 ZXDAP98168 799 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 PSG3Q16557 428 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 CT83Q5H943 113 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 ADAMTSL5Q6ZMM2 481 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 RFESDQ8TAC1 157 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 FER1L6-AS2Q96M78 137 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 ZNF488Q96MN9 340 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 IFNL4K9M1U5 179 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 HOXA3O43365 443 aaPredicted RBP5.41□□□□□ -1.54
PCNX1-207ENST00000554691 OR2H2O95918 312 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 TNXAQ16473 311 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 TAL2Q16559 108 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 OR5AN1Q8NGI8 311 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 SRSF12Q8WXF0 261 aaKnown RBP5.41□□□□□ -1.54
PCNX1-207ENST00000554691 SSBP3Q9BWW4 388 aaPredicted RBP5.41□□□□□ -1.54
PCNX1-207ENST00000554691 MS4A5Q9H3V2 200 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 VSIRQ9H7M9 311 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 HILPDAQ9Y5L2 63 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 GVINP1Q7Z2Y8 2422 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 SBF1O95248 1867 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 RIF1Q5UIP0 2472 aaKnown RBP5.41□□□□□ -1.54
PCNX1-207ENST00000554691 IGHV3-9P01782 118 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 SSBP2P81877 361 aaPredicted RBP5.41□□□□□ -1.54
PCNX1-207ENST00000554691 SSPNQ14714 243 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 KRTCAP3Q53RY4 240 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 PCSK4Q6UW60 755 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 UNQ6494/PRO21346Q6UXR6 183 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 ASCL4Q6XD76 172 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 CENPVQ7Z7K6 275 aaPredicted RBP5.41□□□□□ -1.54
PCNX1-207ENST00000554691 PRNTQ86SH4 94 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 IFI27L1Q96BM0 104 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 FLYWCH2Q96CP2 140 aaKnown RBP5.41□□□□□ -1.54
PCNX1-207ENST00000554691 RASL11BQ9BPW5 248 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 GFRA4Q9GZZ7 299 aa5.41□□□□□ -1.54
PCNX1-207ENST00000554691 LOC389332A0A1B0GUA5 103 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 MLNRO43193 412 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 TNFRSF1AP19438 455 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 AZU1P20160 251 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 LYZP61626 148 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 GAGE5Q13069 117 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 GAGE6Q13070 117 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 FAM231DQ6ZW35 169 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 FADS6Q8N9I5 356 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 C18orf32Q8TCD1 76 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 C11orf52Q96A22 123 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 RASL10BQ96S79 203 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 DOCK6Q96HP0 2047 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 IGKV1D-8A0A087WSZ0 117 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 A0A1W2PQM1 296 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 CD55P08174 381 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 LIFP15018 202 aa5.4□□□□□ -1.54
PCNX1-207ENST00000554691 RPL8P62917 257 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms