RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 LY6LH3BQJ8 138 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 ST8SIA5O15466 376 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 WIPF1O43516 503 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 FAM106CPP0CH98 169 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 GPR12P47775 334 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 RAB7AP51149 207 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 CAV2P51636 162 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 PAX9P55771 341 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 TAS2R30P59541 319 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 RPL23AP62750 156 aaKnown RBP9.9□□□□□ -0.82
SHMT2-214ENST00000554604 NHLH2Q02577 135 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 Q6ZRM9 215 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 CCDC28AQ8IWP9 274 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-214ENST00000554604 CD300LFQ8TDQ1 290 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 SMIM8Q96KF7 97 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 MAGT1Q9H0U3 335 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 WFDC1Q9HC57 220 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 GFOD1Q9NXC2 390 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 WSB1Q9Y6I7 421 aa9.9□□□□□ -0.82
SHMT2-214ENST00000554604 CMYA5Q8N3K9 4069 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 RAB29O14966 203 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 SYNGR2O43760 224 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
SHMT2-214ENST00000554604 BLOC1S1P78537 153 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 HES1Q14469 280 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 ZNF266Q14584 549 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 NSUN5P1Q3KNT7 163 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 TMEM95Q3KNT9 176 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 Q3ZCU0 254 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 Q6ZS46 218 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 SPAG16Q8N0X2 631 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 OR1S2Q8NGQ3 325 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 MARC2Q969Z3 335 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 RBM14Q96PK6 669 aaKnown RBP9.89□□□□□ -0.83
SHMT2-214ENST00000554604 IFI27L2Q9H2X8 130 aa9.89□□□□□ -0.83
SHMT2-214ENST00000554604 A0A1W2PPE3 182 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 ZNF705EA8MWA4 302 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-214ENST00000554604 M0QZK8 103 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.835e-15■■■■■ 33.3
SHMT2-214ENST00000554604 MED6O75586 246 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 TMEM50AO95807 157 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 SPP1P10451 314 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 CD28P10747 220 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 KIR2DS2P43631 304 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 BRWD1-AS2P59051 145 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 C9orf152Q5JTZ5 239 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 IL34Q6ZMJ4 242 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 CENPVQ7Z7K6 275 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-214ENST00000554604 ODF3L1Q8IXM7 274 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 LYG1Q8N1E2 194 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 STPG2Q8N412 459 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
SHMT2-214ENST00000554604 FAM90A9PA6NNJ1 464 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 LINC00473A8K010 186 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 TEX46H3BTG2 121 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 TXNL1O43396 289 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 RAMP3O60896 148 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 PROP1O75360 226 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 S1PR2O95136 353 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 SNRNP70P08621 437 aaKnown RBP9.87□□□□□ -0.83
SHMT2-214ENST00000554604 SULT1A1P50225 295 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 RAB5CP51148 216 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 ZNF816Q0VGE8 651 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-214ENST00000554604 IZUMO4Q1ZYL8 232 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 STX12Q86Y82 276 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 THNSL2Q86YJ6 484 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 ZNF439Q8NDP4 499 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 OR5AU1Q8NGC0 362 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 LINC00052Q96N35 136 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 ABHD14AQ9BUJ0 271 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 WNT10AQ9GZT5 417 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-214ENST00000554604 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 HSPB7Q9UBY9 170 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 MOB4Q9Y3A3 225 aa9.87□□□□□ -0.83
SHMT2-214ENST00000554604 STRAPQ9Y3F4 350 aaKnown RBP9.87□□□□□ -0.83
SHMT2-214ENST00000554604 A0A1W2PPI3 338 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 DFFBO76075 338 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 NXPH3O95157 252 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 HPRT1P00492 218 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 OPN1MWP04001 364 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 OPN1MW2P0DN77 364 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 OPN1MW3P0DN78 364 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 TMEM11P17152 192 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 IL3RAP26951 378 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 G6PCP35575 357 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 ZNF134P52741 427 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 PJVKQ0ZLH3 352 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 DIAPH2-AS1Q14236 149 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 HNF4GQ14541 408 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 FBLN7Q53RD9 439 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 OR2B11Q5JQS5 317 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 PXDC1Q5TGL8 231 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 H2BFWTQ7Z2G1 175 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 MOB3BQ86TA1 216 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 NDUFA11Q86Y39 141 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 OR4F17Q8NGA8 305 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms