RNA–Protein interactions for RNA: ENST00000554244.5

RAD51B-219, Transcript of RAD51 paralog B, human

TSL 3

Gene RAD51B, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-219	ENST00000554244	FABP9	Q0Z7S8	132 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	KIAA0141	Q14154	515 aa	Predicted RBP	4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	HNF4G	Q14541	408 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	TMEM241	Q24JQ0	296 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	ZNF674	Q2M3X9	581 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	PRR30	Q53SZ7	412 aa	Predicted RBP	4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	ZNF833P	Q6ZTB9	187 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	LINC00311	Q8N616	119 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	C8orf31	Q8N9H6	132 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	ZNF596	Q8TC21	504 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	GATAD1	Q8WUU5	269 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	NEUROG1	Q92886	237 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	SNRNP40	Q96DI7	357 aa	Known RBP	4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	ZNF714	Q96N38	554 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	C12orf57	Q99622	126 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	TXNDC17	Q9BRA2	123 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	PARL	Q9H300	379 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	SAP30L	Q9HAJ7	183 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	NGB	Q9NPG2	151 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	BET1L	Q9NYM9	111 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	LSM4	Q9Y4Z0	139 aa	Known RBP	4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	PPIAL4A	Q9Y536	164 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	OR51B2	Q9Y5P1	312 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	PXMP4	Q9Y6I8	212 aa		4.81	□□□□□ -1.64
RAD51B-219	ENST00000554244	MGA	Q8IWI9	3026 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	WNK2	Q9Y3S1	2297 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	HIVEP3	Q5T1R4	2406 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	TRBV24-1	A0A075B6N3	115 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244		A0A1W2PPV4	95 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	SHISA9	B4DS77	424 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	HMGB3	O15347	200 aa	Known RBP	4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	VENTX	O95231	258 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	CA2	P00918	260 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	CD3E	P07766	207 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	STAG3L2	P0CL84	134 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	STAG3L3	P0CL85	134 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	SAA1	P0DJI8	122 aa	Predicted RBP	4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	PLA2G5	P39877	138 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	RPL31	P62899	125 aa	Known RBP	4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	EFNB3	Q15768	340 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	ADIRF	Q15847	76 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	BSX	Q3C1V8	233 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	TMEM177	Q53S58	311 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	LRRC10	Q5BKY1	277 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	NCMAP	Q5T1S8	102 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	TEPP	Q6URK8	271 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	C16orf82	Q7Z2V1	217 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	IQCF2	Q8IXL9	164 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	ABHD12	Q8N2K0	398 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	OR1L8	Q8NGR8	309 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	OR4F5	Q8NH21	305 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	OSR1	Q8TAX0	266 aa	Predicted RBP	4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	RND1	Q92730	232 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	RNASE6	Q93091	150 aa	Known RBP	4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	RPUSD4	Q96CM3	377 aa	Known RBP	4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	C1orf159	Q96HA4	380 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	OR4F4	Q96R69	305 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	SSX3	Q99909	188 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	VKORC1	Q9BQB6	163 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	MRPL20	Q9BYC9	149 aa	Known RBP	4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	PLEKHA3	Q9HB20	300 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	NPVF	Q9HCQ7	196 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	DYNLRB1	Q9NP97	96 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	TMEM106B	Q9NUM4	274 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	FKBP11	Q9NYL4	201 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	KAAG1	Q9UBP8	84 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	SH3BGRL2	Q9UJC5	107 aa		4.8	□□□□□ -1.64
RAD51B-219	ENST00000554244	TPR	P12270	2363 aa	Known RBP	4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	PIEZO2	Q9H5I5	2752 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244		A0A087X0M5	115 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244		A0A1B0GX30	115 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	C11orf94	C9JXX5	98 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244		E7EQL1	145 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	INS-IGF2	F8WCM5	200 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244		H0YJW9	148 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244		H7BYZ3	331 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244		J3QR06	171 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	NDUFB3	O43676	98 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	PDE6D	O43924	150 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	CXorf1	O96002	111 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	S100A9	P06702	114 aa	Known RBP	4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	PFN1	P07737	140 aa	Known RBP	4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	ARL14EPL	P0DKL9	152 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	RNASE2	P10153	161 aa	Known RBP	4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	DEFA4	P12838	97 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	MYOD1	P15172	320 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	CCL3L1	P16619	93 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	HOXA5	P20719	270 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	USF1	P22415	310 aa	Predicted RBP	4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	LOX	P28300	417 aa	Predicted RBP	4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	GCHFR	P30047	84 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	RPL29	P47914	159 aa	Known RBP	4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	ATP5G3	P48201	142 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	ZNF137P	P52743	207 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	DLX6	P56179	175 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	B2M	P61769	119 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	RHOB	P62745	196 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	GNB1	P62873	340 aa		4.79	□□□□□ -1.64
RAD51B-219	ENST00000554244	S100A12	P80511	92 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms