RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	FABP3	P05413	133 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	CTSD	P07339	412 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	MRPL3	P09001	348 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	APELA	P0DMC3	54 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	HTN3	P15516	51 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	PIGY	Q3MUY2	71 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	UNQ9165/PRO28630	Q6UXU0	137 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	PDPN	Q86YL7	162 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	AQP11	Q8NBQ7	271 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR9Q2	Q8NGE9	314 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR5D14	Q8NGL3	314 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR4K15	Q8NH41	348 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR52N1	Q8NH53	320 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	GALM	Q96C23	342 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	PYURF	Q96I23	114 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	TTTY10	Q9BZA0	68 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686		Q9H8V8	135 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	SLC2A9	Q9NRM0	540 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	LRP2	P98164	4655 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	DSCAML1	Q8TD84	2053 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	MAGEB4	O15481	346 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	GPX5	O75715	221 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	MAS1	P04201	325 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	IGKV1-16	P04430	117 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	CD5	P06127	495 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR2T7	P0C7T2	308 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	TFPI2	P48307	235 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	RPS27A	P62979	156 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	CBX3	Q13185	183 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	GNMT	Q14749	295 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	USF2	Q15853	346 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	TNXA	Q16473	311 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	MPV17L	Q2QL34	196 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	RPL39P5	Q59GN2	51 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	NHLRC3	Q5JS37	347 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	LCE3C	Q5T5A8	94 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	NXNL2	Q5VZ03	156 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	DMKN	Q6E0U4	476 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	GLYAT	Q6IB77	296 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	PLET1	Q6UQ28	207 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	PLEKHG7	Q6ZR37	379 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	HOGA1	Q86XE5	327 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR13C9	Q8NGT0	318 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	GIMAP1	Q8WWP7	306 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	SRSF12	Q8WXF0	261 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	CXorf58	Q96LI9	332 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	GPER1	Q99527	375 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	HOPX	Q9BPY8	73 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	URM1	Q9BTM9	101 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	TMEM70	Q9BUB7	260 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	MAGT1	Q9H0U3	335 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	DAPK2	Q9UIK4	370 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	ZNF257	Q9Y2Q1	563 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	GMPPB	Q9Y5P6	360 aa		4.03	□□□□□ -1.76
ATXN3-223	ENST00000553686	METTL15	A6NJ78	407 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	KRTAP9-6	A8MVA2	160 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686		K7EMT4	169 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	GEMIN2	O14893	280 aa	Known RBP	4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	CREBL2	O60519	120 aa	Predicted RBP	4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	SULT1C4	O75897	302 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	IGHV3-23	P01764	117 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	CRYGB	P07316	175 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	GIG44	P09565	113 aa	Predicted RBP	4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686		P0C879	139 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	HIST1H1B	P16401	226 aa	Known RBP	4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	RCC1	P18754	421 aa	Predicted RBP	4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	SLC2A5	P22732	501 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	RBM11	P57052	281 aa	Known RBP	4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	GINS1	Q14691	196 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	OXA1L	Q15070	435 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	ATP6AP1	Q15904	470 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	TNFAIP8L3	Q5GJ75	292 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	SLC35F2	Q8IXU6	374 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	C10orf67	Q8IYJ2	551 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	OR5AP2	Q8NGF4	316 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	OR10K1	Q8NGX5	313 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	TNFAIP8L1	Q8WVP5	186 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	ATP6V1G3	Q96LB4	118 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	OR2A7	Q96R45	310 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	S100A13	Q99584	98 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	NIPSNAP3B	Q9BS92	247 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	METTL9	Q9H1A3	318 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	IFI27L2	Q9H2X8	130 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686		Q9H3A6	140 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	CLN6	Q9NWW5	311 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	ABRACL	Q9P1F3	81 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	ETV7	Q9Y603	341 aa		4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
ATXN3-223	ENST00000553686	IGHV3-35	A0A0C4DH35	117 aa		4.01	□□□□□ -1.77
ATXN3-223	ENST00000553686	SMIM9	A6NGZ8	99 aa		4.01	□□□□□ -1.77
ATXN3-223	ENST00000553686	DNASE2	O00115	360 aa	Predicted RBP	4.01	□□□□□ -1.77
ATXN3-223	ENST00000553686	ITGB1BP1	O14713	200 aa		4.01	□□□□□ -1.77
ATXN3-223	ENST00000553686	ZNF780A	O75290	641 aa	Predicted RBP	4.01	□□□□□ -1.77
ATXN3-223	ENST00000553686	FAM107A	O95990	144 aa		4.01	□□□□□ -1.77
ATXN3-223	ENST00000553686	IGLV2-23	P01705	113 aa		4.01	□□□□□ -1.77
ATXN3-223	ENST00000553686	SEMG1	P04279	462 aa		4.01	□□□□□ -1.77
ATXN3-223	ENST00000553686	ISG15	P05161	165 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms