RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GGCTO75223 188 aaKnown RBP13.74□□□□□ -0.21
SHMT2-206ENST00000553529 CLEC3BP05452 202 aa13.74□□□□□ -0.21
SHMT2-206ENST00000553529 ZNF182P17025 639 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-206ENST00000553529 PPP5CP53041 499 aa13.74□□□□□ -0.21
SHMT2-206ENST00000553529 DEFB114Q30KQ6 69 aa13.74□□□□□ -0.21
SHMT2-206ENST00000553529 ZNF502Q8TBZ5 544 aa13.74□□□□□ -0.21
SHMT2-206ENST00000553529 MRGPRFQ96AM1 343 aa13.74□□□□□ -0.21
SHMT2-206ENST00000553529 EEF1AKMT3Q96AZ1 226 aa13.74□□□□□ -0.21
SHMT2-206ENST00000553529 MRPS26Q9BYN8 205 aaKnown RBP13.74□□□□□ -0.21
SHMT2-206ENST00000553529 SCPEP1Q9HB40 452 aa13.74□□□□□ -0.21
SHMT2-206ENST00000553529 OR51B2Q9Y5P1 312 aa13.74□□□□□ -0.21
SHMT2-206ENST00000553529 ZNF320A2RRD8 509 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 F8W735 103 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-206ENST00000553529 TRAPPC2P0DI81 140 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 TRAPPC2BP0DI82 140 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 CD81P60033 236 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 ERVK-16P61578 105 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 CLVS1Q8IUQ0 354 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-206ENST00000553529 DEFB125Q8N687 156 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 DYNLRB2Q8TF09 96 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 CMTM3Q96MX0 182 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 NDUFA4L2Q9NRX3 87 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 SIGLEC8Q9NYZ4 499 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 PEMTQ9UBM1 199 aa13.73□□□□□ -0.21
SHMT2-206ENST00000553529 IGHV3-48P01763 117 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 TATDN3Q17R31 274 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 GPR141Q7Z602 305 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 CMTM1Q8IZ96 169 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 Q8N402 240 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 GDPD1Q8N9F7 314 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 SEC22AQ96IW7 307 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 TP53RKQ96S44 253 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 FAM110AQ9BQ89 295 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 TM2D3Q9BRN9 247 aa13.72□□□□□ -0.21
SHMT2-206ENST00000553529 OR2T8A6NH00 312 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 H0Y980 276 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 SERPINE2P07093 398 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 CBLN1P23435 193 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 GUCA2BQ16661 112 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 HAGHQ16775 308 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 SP6Q3SY56 376 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 SLC25A24Q6NUK1 477 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 MZT2AQ6P582 158 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 BTNL8Q6UX41 500 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 LHFPL1Q86WI0 220 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 SGPP2Q8IWX5 399 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 TMEM61Q8N0U2 210 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 OR1L8Q8NGR8 309 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 CD300LFQ8TDQ1 290 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 CHRDL1Q9BU40 450 aa13.71□□□□□ -0.21
SHMT2-206ENST00000553529 DNAH7Q8WXX0 4024 aa13.7□□□□□ -0.22
SHMT2-206ENST00000553529 K7EIM0 57 aa13.7□□□□□ -0.22
SHMT2-206ENST00000553529 ZNF207O43670 478 aaKnown RBP13.7□□□□□ -0.22
SHMT2-206ENST00000553529 SCAF4O95104 1147 aaKnown RBP13.7□□□□□ -0.22
SHMT2-206ENST00000553529 IGKV1-5P01602 117 aa13.7□□□□□ -0.22
SHMT2-206ENST00000553529 PGAM2P15259 253 aa13.7□□□□□ -0.22
SHMT2-206ENST00000553529 GPHB5Q86YW7 130 aa13.7□□□□□ -0.22
SHMT2-206ENST00000553529 UXS1Q8NBZ7 420 aa13.7□□□□□ -0.22
SHMT2-206ENST00000553529 NEURL2Q9BR09 285 aa13.7□□□□□ -0.22
SHMT2-206ENST00000553529 MTFP1Q9UDX5 166 aa13.7□□□□□ -0.22
SHMT2-206ENST00000553529 A0A0G2JRQ6 117 aa13.69□□□□□ -0.22
SHMT2-206ENST00000553529 RBMY1BA6NDE4 496 aaKnown RBP13.69□□□□□ -0.22
SHMT2-206ENST00000553529 RBMY1EA6NEQ0 496 aaKnown RBP13.69□□□□□ -0.22
SHMT2-206ENST00000553529 C15orf61A6NNL5 157 aa13.69□□□□□ -0.22
SHMT2-206ENST00000553529 LGALS9O00182 355 aa13.69□□□□□ -0.22
SHMT2-206ENST00000553529 RGS5O15539 181 aa13.69□□□□□ -0.22
SHMT2-206ENST00000553529 RBMY1DP0C7P1 496 aaKnown RBP13.69□□□□□ -0.22
SHMT2-206ENST00000553529 HIST1H1BP16401 226 aaKnown RBP13.69□□□□□ -0.22
SHMT2-206ENST00000553529 RNASE10Q5GAN6 216 aaKnown RBP13.69□□□□□ -0.22
SHMT2-206ENST00000553529 SLC38A6Q8IZM9 456 aa13.69□□□□□ -0.22
SHMT2-206ENST00000553529 AIFM2Q9BRQ8 373 aa13.69□□□□□ -0.22
SHMT2-206ENST00000553529 TMEM14BQ9NUH8 114 aa13.69□□□□□ -0.22
SHMT2-206ENST00000553529 F11RQ9Y624 299 aaKnown RBP13.69□□□□□ -0.22
SHMT2-206ENST00000553529 A8MZ25 164 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 DHFRP00374 187 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 ADMP35318 185 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 UCP3P55916 312 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 PIGPP57054 158 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 SCGB2B2Q4G0G5 96 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 GTSCR1Q86UQ5 136 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 UBAC2Q8NBM4 344 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 SCARB1Q8WTV0 552 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 AP3S1Q92572 193 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 LSM10Q969L4 123 aaKnown RBP13.68□□□□□ -0.22
SHMT2-206ENST00000553529 NBEAL2Q6ZNJ1 2754 aa13.68□□□□□ -0.22
SHMT2-206ENST00000553529 STAB2Q8WWQ8 2551 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 TRBV7-1A0A0A6YYK4 115 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 A8MWP6 167 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 TGOLN2O43493 480 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 SNAPC5O75971 98 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 PTBP1P26599 531 aaKnown RBP eCLIP13.67□□□□□ -0.22
SHMT2-206ENST00000553529 FAM209BQ5JX69 171 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 ZFAND6Q6FIF0 208 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 PLET1Q6UQ28 207 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 LINC00322Q6ZN03 302 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-206ENST00000553529 OR13C8Q8NGS7 320 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 MARCH1Q8TCQ1 289 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 DYNC2LI1Q8TCX1 351 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 BORCS5Q969J3 196 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms