RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 EXOSC2Q13868 293 aaKnown RBP11.77□□□□□ -0.53
SHMT2-204ENST00000553324 SURF2Q15527 256 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-204ENST00000553324 H2BFWTQ7Z2G1 175 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 OR4D10Q8NGI6 311 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 OR9G4Q8NGQ1 327 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 CXorf58Q96LI9 332 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 TMEM56Q96MV1 263 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 FANCD2OSQ96PS1 177 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 PRRT1Q99946 306 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 SOSTQ9BQB4 213 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 NDUFA4L2Q9NRX3 87 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 OR51B2Q9Y5P1 312 aa11.77□□□□□ -0.53
SHMT2-204ENST00000553324 TRBV7-1A0A0A6YYK4 115 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 IGLC7A0M8Q6 106 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 CGB1A6NKQ9 187 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 H0Y980 276 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 RBMXL2O75526 392 aaKnown RBP11.76□□□□□ -0.53
SHMT2-204ENST00000553324 CTSDP07339 412 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-204ENST00000553324 MYOD1P15172 320 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 OR4A16Q8NH70 328 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
SHMT2-204ENST00000553324 EEF1AKMT3Q96AZ1 226 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 SEC22AQ96IW7 307 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 SCGB3A2Q96PL1 93 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 PEMTQ9UBM1 199 aa11.76□□□□□ -0.53
SHMT2-204ENST00000553324 C14orf166Q9Y224 244 aaKnown RBP11.76□□□□□ -0.53
SHMT2-204ENST00000553324 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
SHMT2-204ENST00000553324 OR13C7P0DN81 318 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 PI3P19957 117 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 PPP5CP53041 499 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 SYNJ2BPP57105 145 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 DEFA5Q01523 94 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 SCP2D1Q9UJQ7 156 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 TGP01266 2768 aa11.75□□□□□ -0.53
SHMT2-204ENST00000553324 ANKRD20A5PA0PJZ0 165 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 NDUFB8O95169 186 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 LY86O95711 162 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 REG1AP05451 166 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 AP3S2P59780 193 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 GDPD1Q8N9F7 314 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 OR13C8Q8NGS7 320 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 MARCH1Q8TCQ1 289 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 THAP7Q9BT49 309 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-204ENST00000553324 HINT2Q9BX68 163 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 RBM38Q9H0Z9 239 aaKnown RBP11.74□□□□□ -0.53
SHMT2-204ENST00000553324 SLC2A8Q9NY64 477 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 NSG2Q9Y328 171 aa11.74□□□□□ -0.53
SHMT2-204ENST00000553324 BMPR1BO00238 502 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 IGKV1-39P01597 117 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 IGKV1D-39P04432 117 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 FAUP35544 74 aaKnown RBP11.73□□□□□ -0.53
SHMT2-204ENST00000553324 TRIM16LQ309B1 348 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 OR10W1Q8NGF6 305 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 OR4C16Q8NGL9 310 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 PRR25Q96S07 402 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 TP53RKQ96S44 253 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 NDUFA13Q9P0J0 144 aa11.73□□□□□ -0.53
SHMT2-204ENST00000553324 IGLV1-51P01701 117 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 CLEC3BP05452 202 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 MECP2P51608 486 aaKnown RBP11.72□□□□□ -0.53
SHMT2-204ENST00000553324 HSPE1P61604 102 aaKnown RBP11.72□□□□□ -0.53
SHMT2-204ENST00000553324 WT1-ASQ06250 92 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 FAM106AQ4KMX7 169 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 PYDC2Q56P42 97 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 FAAP20Q6NZ36 180 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 CLEC19AQ6UXS0 136 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 C19orf35Q6ZS72 473 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 GPHB5Q86YW7 130 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 DEDD2Q8WXF8 326 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
SHMT2-204ENST00000553324 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 B9D2Q9BPU9 175 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 RTBDNQ9BSG5 229 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-204ENST00000553324 GPR132Q9UNW8 380 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 KCNIP3Q9Y2W7 256 aa11.72□□□□□ -0.53
SHMT2-204ENST00000553324 LSM4Q9Y4Z0 139 aaKnown RBP11.72□□□□□ -0.53
SHMT2-204ENST00000553324 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
SHMT2-204ENST00000553324 TEX13DA0A0J9YY54 714 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-204ENST00000553324 LGALS9O00182 355 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 GP9P14770 177 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 SPNP16150 400 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 UCP1P25874 307 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 ARL3P36405 182 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 AKR1C2P52895 323 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 ERHP84090 104 aaKnown RBP11.71□□□□□ -0.53
SHMT2-204ENST00000553324 DHODHQ02127 395 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 CD69Q07108 199 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 SPANXN2Q5MJ10 180 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 IL34Q6ZMJ4 242 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms