RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 CIARTQ8N365 385 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-208ENST00000553289 CCL19Q99731 98 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 SDF2L1Q9HCN8 221 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 LHX2P50458 406 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 SLC25A28Q96A46 364 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 WBP1Q96G27 269 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 GRIFINA4D1Z8 144 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 DPRXA6NFQ7 191 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 FAM90A9PA6NNJ1 464 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 CGAP01215 116 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 CBLN1P23435 193 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 TFF3Q07654 80 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 PRSS8Q16651 343 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 ZNF362Q5T0B9 420 aaPredicted RBP9.71□□□□□ -0.85
SYNE2-208ENST00000553289 REC114Q7Z4M0 266 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 TMEM144Q7Z5S9 345 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 TMEM190Q8WZ59 177 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 FAM27E3Q08E93 113 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 SRSF7Q16629 238 aaKnown RBP eCLIP9.71□□□□□ -0.85
SYNE2-208ENST00000553289 OR52E5Q8NH55 327 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 C21orf62Q9NYP8 219 aa9.71□□□□□ -0.85
SYNE2-208ENST00000553289 FOXI3A8MTJ6 420 aaPredicted RBP9.71□□□□□ -0.86
SYNE2-208ENST00000553289 ATP5LO75964 103 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 RP1P56715 2156 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 A0A1B0GUT8 65 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 C17orf100A8MU93 164 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 PROB1E7EW31 1015 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 TRGV3P03979 118 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 LTBRP36941 435 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 ZNF56Q15929 161 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 FAM216BQ8N7L0 139 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 ZNF414Q96IQ9 312 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 NEUROG3Q9Y4Z2 214 aa9.71□□□□□ -0.86
SYNE2-208ENST00000553289 A0A0G2JMM0 328 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 A0A1W2PPB8 328 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 A0A1W2PRS3 328 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 KIR3DP1A8MWS1 328 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 EFEMP2O95967 443 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 SOD3P08294 240 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 LY6EQ16553 131 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 NR2C2APQ86WQ0 139 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 RPP21Q9H633 154 aaKnown RBP9.7□□□□□ -0.86
SYNE2-208ENST00000553289 OR11H12B2RN74 326 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 F8VVB4 439 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 F8VWA3 439 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 H3BTX0 84 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 GFRA3O60609 400 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 HIST1H1AQ02539 215 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-208ENST00000553289 BIVMQ86UB2 503 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 CRIPAKQ8N1N5 446 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 OR11H1Q8NG94 326 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 OR11H2Q8NH07 326 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 RTN4RQ9BZR6 473 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 FBXL15Q9H469 300 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 C7orf71A4D174 169 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 ASIPP42127 132 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 LINC01560Q8TB33 94 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 PRELID3AQ96N28 172 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
SYNE2-208ENST00000553289 FBXL7Q9UJT9 491 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 MTCL1Q9Y4B5 1905 aaKnown RBP9.7□□□□□ -0.86
SYNE2-208ENST00000553289 A1L4Q6 167 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 ZNF497Q6ZNH5 498 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 ARPC1AQ92747 370 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 PARD6GQ9BYG4 376 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-208ENST00000553289 CHODLQ9H9P2 273 aa9.7□□□□□ -0.86
SYNE2-208ENST00000553289 UPK2O00526 184 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 EGR1P18146 543 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 BSPH1Q075Z2 132 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 CENPVQ7Z7K6 275 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-208ENST00000553289 IZUMO1RA6ND01 250 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 PLPPR1Q8TBJ4 325 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 RNF126Q9BV68 326 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 MRPL20Q9BYC9 149 aaKnown RBP9.69□□□□□ -0.86
SYNE2-208ENST00000553289 WDR90Q96KV7 1748 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 SCO2A0A1W2PP80 73 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 NUTF2P61970 127 aaKnown RBP9.69□□□□□ -0.86
SYNE2-208ENST00000553289 PPP1R27Q86WC6 154 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 ZNF837Q96EG3 531 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-208ENST00000553289 SGK494Q96LW2 274 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 DNAJC13O75165 2243 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 ATXN7O15265 892 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-208ENST00000553289 DCTN5Q9BTE1 182 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 AKIRIN1Q9H9L7 192 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-208ENST00000553289 C15orf61A6NNL5 157 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 IGKV1D-33P01593 117 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 IGKV1-33P01594 117 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 PRSS2P07478 247 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 ZIC4Q8N9L1 334 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 NEUROG1Q92886 237 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 OTORQ9NRC9 128 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 CBLN4Q9NTU7 201 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 DOCK3Q8IZD9 2030 aa9.69□□□□□ -0.86
SYNE2-208ENST00000553289 IGKV1-9A0A0C4DH69 117 aa9.68□□□□□ -0.86
SYNE2-208ENST00000553289 NPFFO15130 113 aa9.68□□□□□ -0.86
SYNE2-208ENST00000553289 CEACAM4O75871 244 aa9.68□□□□□ -0.86
SYNE2-208ENST00000553289 CFHR1Q03591 330 aa9.68□□□□□ -0.86
SYNE2-208ENST00000553289 PVRIGQ6DKI7 326 aa9.68□□□□□ -0.86
SYNE2-208ENST00000553289 PEF1Q9UBV8 284 aaKnown RBP9.68□□□□□ -0.86
SYNE2-208ENST00000553289 TDRD6O60522 2096 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms