RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 SSBP2P81877 361 aaPredicted RBP9.03□□□□□ -0.96
CKAP4-202ENST00000552828 BAK1Q16611 211 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 NDUFA5Q16718 116 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 HAGHQ16775 308 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 IDO2Q6ZQW0 420 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 NRARPQ7Z6K4 114 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 MMD2Q8IY49 270 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 VKORC1L1Q8N0U8 176 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 OR4C16Q8NGL9 310 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 GRPEL2Q8TAA5 225 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 ZFAND1Q8TCF1 268 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 OR2A7Q96R45 310 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 PRRT1Q99946 306 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 PLEKHA2Q9HB19 425 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 SLC2A9Q9NRM0 540 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 SIGLEC8Q9NYZ4 499 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 A0A0G2JLM5 398 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 C13orf42A0A1B0GVH6 325 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 H0Y980 276 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 RGS13O14921 159 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 CCNKO75909 580 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 NQO2P16083 231 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 FAUP35544 74 aaKnown RBP9.02□□□□□ -0.97
CKAP4-202ENST00000552828 FAAP20Q6NZ36 180 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 SSX9Q7RTT3 188 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 TBC1D26Q86UD7 250 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 PUSL1Q8N0Z8 303 aaKnown RBP9.02□□□□□ -0.97
CKAP4-202ENST00000552828 TOMM5Q8N4H5 51 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 OR9G4Q8NGQ1 327 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 TMEM68Q96MH6 324 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 ZNF430Q9H8G1 570 aaPredicted RBP9.02□□□□□ -0.97
CKAP4-202ENST00000552828 MCUBQ9NWR8 336 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 COMMD9Q9P000 198 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 SCP2D1Q9UJQ7 156 aa9.02□□□□□ -0.97
CKAP4-202ENST00000552828 MPPED1O15442 326 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 KBTBD11O94819 623 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 S1PR2O95136 353 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 CTSDP07339 412 aaPredicted RBP9.01□□□□□ -0.97
CKAP4-202ENST00000552828 PI3P19957 117 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 LPAR6P43657 344 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 MECP2P51608 486 aaKnown RBP9.01□□□□□ -0.97
CKAP4-202ENST00000552828 PIGPP57054 158 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 ERVK-16P61578 105 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 RND3P61587 244 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 SURF2Q15527 256 aaPredicted RBP9.01□□□□□ -0.97
CKAP4-202ENST00000552828 TNXAQ16473 311 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 POU2AF1Q16633 256 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 MRGPRG-AS1Q2M3A8 158 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 OR4A47Q6IF82 309 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 MZT2BQ6NZ67 158 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 ADAMTSL5Q6ZMM2 481 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 CCDC71LQ8N9Z2 235 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 DMBX1Q8NFW5 382 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 OR51S1Q8NGJ8 323 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 OR13C8Q8NGS7 320 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 OR4A5Q8NH83 315 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 TMEM167AQ8TBQ9 72 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 MARCH1Q8TCQ1 289 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 DEDD2Q8WXF8 326 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 TRIM63Q969Q1 353 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 SCGB3A2Q96PL1 93 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 HRASLSQ9HDD0 168 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 FAM212BQ9NTI7 297 aaPredicted RBP9.01□□□□□ -0.97
CKAP4-202ENST00000552828 SLC2A8Q9NY64 477 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 BET1LQ9NYM9 111 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 COPZ2Q9P299 210 aa9.01□□□□□ -0.97
CKAP4-202ENST00000552828 C14orf166Q9Y224 244 aaKnown RBP9.01□□□□□ -0.97
CKAP4-202ENST00000552828 MSGN1A6NI15 193 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 CSN3P07498 182 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 MAS1LP35410 378 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 INPP1P49441 399 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 RPL8P62917 257 aaKnown RBP9□□□□□ -0.97
CKAP4-202ENST00000552828 KLF9Q13886 244 aaPredicted RBP9□□□□□ -0.97
CKAP4-202ENST00000552828 ZNF585BQ52M93 769 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 ZNF343Q6P1L6 599 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 LINC00322Q6ZN03 302 aaPredicted RBP9□□□□□ -0.97
CKAP4-202ENST00000552828 DUSP18Q8NEJ0 188 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 OR5T1Q8NG75 326 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 SRSF12Q8WXF0 261 aaKnown RBP9□□□□□ -0.97
CKAP4-202ENST00000552828 MRGPRFQ96AM1 343 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 PHB2Q99623 299 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 SPIN2AQ99865 258 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 SPIN2BQ9BPZ2 258 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 ZNF355PQ9NSJ1 428 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
CKAP4-202ENST00000552828 ANKRD34BA5PLL1 514 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 MARCH11A6NNE9 402 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 UPK2O00526 184 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 PLA2G10O15496 165 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 KRASP01116 189 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 SERPINE2P07093 398 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 SYNJ2BPP57105 145 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 TRIQKQ629K1 86 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 ZNF57Q68EA5 555 aaPredicted RBP8.99□□□□□ -0.97
CKAP4-202ENST00000552828 GTSCR1Q86UQ5 136 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 USMG5Q96IX5 58 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 ST6GAL2Q96JF0 529 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 TMEM140Q9NV12 185 aa8.99□□□□□ -0.97
CKAP4-202ENST00000552828 PEF1Q9UBV8 284 aaKnown RBP8.99□□□□□ -0.97
CKAP4-202ENST00000552828 GPR132Q9UNW8 380 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms