RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 CT45A6P0DMU7 189 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 CT45A5P0DMU8 189 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 CT45A7P0DMV0 189 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 CDKN1AP38936 164 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 RBPJQ06330 500 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 SRSF7Q16629 238 aaKnown RBP eCLIP4.58□□□□□ -1.68
LIMA1-215ENST00000552823 PRSS8Q16651 343 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 LRRC10Q5BKY1 277 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 ZNF506Q5JVG8 444 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 IGFL3Q6UXB1 125 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 ZNF66Q6ZN08 573 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 TCF23Q7RTU1 214 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 SLC35E3Q7Z769 313 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 SLC24A4Q8NFF2 622 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 ZNF714Q96N38 554 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 PCGF1Q9BSM1 259 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 PARLQ9H300 379 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 CTSZQ9UBR2 303 aa4.58□□□□□ -1.68
LIMA1-215ENST00000552823 IGHV3OR16-10A0A075B7F0 116 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ZNF98A6NK75 572 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 YPEL1O60688 119 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 MOSP00540 346 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 C1QTNF9P0C862 333 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ORM2P19652 201 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 S100PP25815 95 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 OPRK1P41145 380 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 CD81P60033 236 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 SSBP2P81877 361 aaPredicted RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 MEF2BQ02080 365 aaPredicted RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 TNXAQ16473 311 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 TMEM241Q24JQ0 296 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ACOT6Q3I5F7 207 aaPredicted RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 C10orf91Q5T1B1 145 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 FAM90A2PQ658T7 463 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 TREML4Q6UXN2 200 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ZNF788Q6ZQV5 615 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 MIR17HGQ75NE6 70 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 COMMD1Q8N668 190 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ZBTB34Q8NCN2 500 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 BLNKQ8WV28 456 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 FAM210BQ96KR6 192 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 CIB3Q96Q77 187 aaPredicted RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 YPEL2Q96QA6 119 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 GPR61Q9BZJ8 451 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 IFT22Q9H7X7 185 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 UNKLQ9H9P5 680 aaKnown RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 VAX2Q9UIW0 290 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 CRYBG3Q68DQ2 2970 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 CTXND1A0A1B0GTU2 59 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 A0A1B0GUS0 222 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 C17orf112F2Z3M2 114 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 APOA2P02652 100 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ACAA1P09110 424 aaPredicted RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 MGST1P10620 155 aaKnown RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 NBL1P41271 181 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 SPCS3P61009 180 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 HSPE1P61604 102 aaKnown RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 KLRD1Q13241 179 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 OR5I1Q13606 314 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 PSG5Q15238 335 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 RTL8BQ17RB0 113 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 BSXQ3C1V8 233 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 KHDC3LQ587J8 217 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 LEMD1Q68G75 181 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 LINC00518Q8N0U6 118 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 MUC15Q8N387 334 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ZNF561Q8N587 486 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 C15orf54Q8N8G6 183 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ZNF114Q8NC26 417 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 OR10D4PQ8NGN7 298 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 TMEM170AQ8WVE7 144 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ZMAT5Q9UDW3 170 aaKnown RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 UTP20O75691 2785 aaKnown RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 IGLV3-9A0A075B6K5 115 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 IGHV1-69-2A0A0G2JMI3 117 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 SCO2A0A1W2PP80 73 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 NPIPB11E5RHQ5 1161 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 SLC17A3O00476 420 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 FCN3O75636 299 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 S100A2P29034 98 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 RAB4BP61018 213 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 HTD2P86397 168 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 ARSJQ5FYB0 599 aaPredicted RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 KLF17Q5JT82 389 aaPredicted RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 PRR27Q6MZM9 219 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 CDPF1Q6NVV7 123 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 MRGPRGQ86SM5 289 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 TGIF2LXQ8IUE1 241 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 STPG3Q8N7X2 389 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 LYPD6BQ8NI32 183 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 FLYWCH2Q96CP2 140 aaKnown RBP4.57□□□□□ -1.68
LIMA1-215ENST00000552823 OR5B12Q96R08 314 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 MGST2Q99735 147 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 BSNQ9UPA5 3926 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 SELENOKQ9Y6D0 94 aa4.57□□□□□ -1.68
LIMA1-215ENST00000552823 CFAP46Q8IYW2 2715 aa4.56□□□□□ -1.68
LIMA1-215ENST00000552823 TRAV34A0A0B4J273 112 aa4.56□□□□□ -1.68
LIMA1-215ENST00000552823 ZNF320A2RRD8 509 aa4.56□□□□□ -1.68
LIMA1-215ENST00000552823 PMS2P5A8MQ11 134 aa4.56□□□□□ -1.68
LIMA1-215ENST00000552823 TMEM178BH3BS89 294 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms