RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 A0A1W2PN81 502 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 CGB1A6NKQ9 187 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 TSPAN9O75954 239 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 NDUFA3O95167 84 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 IFNA17P01571 189 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 IAPPP10997 89 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 CHRNA7P36544 502 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 GPX4P36969 197 aaPredicted RBP7.89□□□□□ -1.15
TMEM116-216ENST00000552800 ARF6P62330 175 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 RAB11AP62491 216 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 SLC38A11Q08AI6 406 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 FAM74A1Q5RGS3 127 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 CLEC9AQ6UXN8 241 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 MMD2Q8IY49 270 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 VKORC1L1Q8N0U8 176 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 Q8N6K4 173 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 TAF15Q92804 592 aaKnown RBP eCLIP7.89□□□□□ -1.15
TMEM116-216ENST00000552800 HARBI1Q96MB7 349 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 CCL19Q99731 98 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 SMIM3Q9BZL3 60 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 NPVFQ9HCQ7 196 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 SIGLEC9Q9Y336 463 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 OR51B2Q9Y5P1 312 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 ZFYVE26Q68DK2 2539 aa7.89□□□□□ -1.15
TMEM116-216ENST00000552800 CEBPZOSA8MTT3 80 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 ZNF705EA8MWA4 302 aaPredicted RBP7.88□□□□□ -1.15
TMEM116-216ENST00000552800 RNASEK-C17orf49H0YIS7 233 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 H7C2Y5 167 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 MBP02144 154 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 OR2B8PP59922 312 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 RPS16P62249 146 aaKnown RBP7.88□□□□□ -1.15
TMEM116-216ENST00000552800 PSG5Q15238 335 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 VMA21Q3ZAQ7 101 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 PXDC1Q5TGL8 231 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 TMEM217Q8N7C4 229 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 LFNGQ8NES3 379 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 SCGB1C1Q8TD33 95 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 FAM168AQ92567 244 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 RPEQ96AT9 228 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 MBD6Q96DN6 1003 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 CLCC1Q96S66 551 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 TBX15Q96SF7 602 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 PIMREGQ9BSJ6 248 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 LPAR2Q9HBW0 351 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 UQCC1Q9NVA1 299 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 COL12A1Q99715 3063 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 MYO18BQ8IUG5 2567 aa7.88□□□□□ -1.15
TMEM116-216ENST00000552800 A0A096LNT2 108 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 RRHO14718 337 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 VENTXO95231 258 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 COX6B1P14854 86 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 SLC25A16P16260 332 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 ZP3P21754 424 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 GATA3P23771 443 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 SNCAP37840 140 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 DVL1P1P54792 670 aaPredicted RBP7.87□□□□□ -1.15
TMEM116-216ENST00000552800 CLINT1Q14677 625 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 PRSS8Q16651 343 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 SPSB3Q6PJ21 355 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 PRSS57Q6UWY2 283 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 ETV3LQ6ZN32 361 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 SSX9Q7RTT3 188 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 PPP1R27Q86WC6 154 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 PNKDQ8N490 385 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 SLC24A4Q8NFF2 622 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 RNASEH2CQ8TDP1 164 aaKnown RBP7.87□□□□□ -1.15
TMEM116-216ENST00000552800 RITA1Q96K30 269 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 MEGF9Q9H1U4 602 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 HEYLQ9NQ87 328 aaPredicted RBP7.87□□□□□ -1.15
TMEM116-216ENST00000552800 BEX4Q9NWD9 120 aaPredicted RBP7.87□□□□□ -1.15
TMEM116-216ENST00000552800 ONECUT1Q9UBC0 465 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 NUP50Q9UKX7 468 aa7.87□□□□□ -1.15
TMEM116-216ENST00000552800 FAM157AC9JC47 383 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 H3BP45 60 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 RBMXL2O75526 392 aaKnown RBP7.86□□□□□ -1.15
TMEM116-216ENST00000552800 NXPH3O95157 252 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 CRYGCP07315 174 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 RNASE2P10153 161 aaKnown RBP7.86□□□□□ -1.15
TMEM116-216ENST00000552800 NPY1RP25929 384 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 CAMLGP49069 296 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 ERHP84090 104 aaKnown RBP7.86□□□□□ -1.15
TMEM116-216ENST00000552800 TMEM267Q0VDI3 215 aaPredicted RBP7.86□□□□□ -1.15
TMEM116-216ENST00000552800 CLEC2AQ6UVW9 174 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 VMO1Q7Z5L0 202 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 MRPL41Q8IXM3 137 aaKnown RBP7.86□□□□□ -1.15
TMEM116-216ENST00000552800 HSD17B11Q8NBQ5 300 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 PCNPQ8WW12 178 aaKnown RBP7.86□□□□□ -1.15
TMEM116-216ENST00000552800 COMMD5Q9GZQ3 224 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 SH3BGRL3Q9H299 93 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 ZNF430Q9H8G1 570 aaPredicted RBP7.86□□□□□ -1.15
TMEM116-216ENST00000552800 PLEKHA3Q9HB20 300 aa7.86□□□□□ -1.15
TMEM116-216ENST00000552800 MED13LQ71F56 2210 aa7.85□□□□□ -1.15
TMEM116-216ENST00000552800 TMEM218A2RU14 115 aa7.85□□□□□ -1.15
TMEM116-216ENST00000552800 SEC14L6B5MCN3 397 aa7.85□□□□□ -1.15
TMEM116-216ENST00000552800 E7EUB6 86 aa7.85□□□□□ -1.15
TMEM116-216ENST00000552800 TOX4O94842 621 aa7.85□□□□□ -1.15
TMEM116-216ENST00000552800 MOSP00540 346 aa7.85□□□□□ -1.15
TMEM116-216ENST00000552800 IFNA10P01566 189 aa7.85□□□□□ -1.15
TMEM116-216ENST00000552800 HBE1P02100 147 aa7.85□□□□□ -1.15
TMEM116-216ENST00000552800 SNRNP70P08621 437 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms