RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 NAA20P61599 178 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 CDK5R1Q15078 307 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 GLT8D1Q68CQ7 371 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 GPR32P1Q8NGA4 272 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 DRC3Q9H069 523 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 PAQR5Q9NXK6 330 aaPredicted RBP0.81□□□□□ -2.28
SCAF11-215ENST00000551391 ATP6V1DQ9Y5K8 247 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 KIF24Q5T7B8 1368 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 FREM1Q5H8C1 2179 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 EIF4G1Q04637 1599 aaKnown RBP0.8□□□□□ -2.28
SCAF11-215ENST00000551391 A0A1B0GV50 99 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 IRGMA1A4Y4 181 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 SDCBPO00560 298 aaPredicted RBP0.8□□□□□ -2.28
SCAF11-215ENST00000551391 DEXIO95424 95 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 METTL15P1P0C7V9 234 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 KCNE1P15382 129 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 REG1BP48304 166 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 ZNF80P51504 273 aaPredicted RBP0.8□□□□□ -2.28
SCAF11-215ENST00000551391 RAB5BP61020 215 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 RPL18Q07020 188 aaKnown RBP0.8□□□□□ -2.28
SCAF11-215ENST00000551391 C10orf55Q5SWW7 151 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 SYPL2Q5VXT5 272 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 RAB8BQ92930 207 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 OPTNQ96CV9 577 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 NKIRAS1Q9NYS0 192 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 IL36BQ9NZH7 164 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 SETD5Q9C0A6 1442 aa0.8□□□□□ -2.28
SCAF11-215ENST00000551391 BAZ2BQ9UIF8 2168 aaKnown RBP0.79□□□□□ -2.28
SCAF11-215ENST00000551391 ACOX3O15254 700 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 HCRTO43612 131 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 DMTNQ08495 405 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 IBA57Q5T440 356 aaKnown RBP0.79□□□□□ -2.28
SCAF11-215ENST00000551391 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 CD200R1LQ6Q8B3 271 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 C15orf53Q8NAA6 179 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 ZNF439Q8NDP4 499 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 CNBD2Q96M20 576 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 ERMAPQ96PL5 475 aaPredicted RBP0.79□□□□□ -2.28
SCAF11-215ENST00000551391 LLPHQ9BRT6 129 aaKnown RBP0.79□□□□□ -2.28
SCAF11-215ENST00000551391 YIPF3Q9GZM5 350 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 EFCAB1Q9HAE3 211 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 BAIAP2Q9UQB8 552 aa0.79□□□□□ -2.28
SCAF11-215ENST00000551391 PCDH15Q96QU1 1955 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 GGT3PA6NGU5 568 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 EVPLLA8MZ36 301 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 CLPSP04118 112 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 ISG15P05161 165 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 TPM3P06753 285 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 RPS12P25398 132 aaKnown RBP0.78□□□□□ -2.28
SCAF11-215ENST00000551391 AP2S1P53680 142 aaPredicted RBP0.78□□□□□ -2.28
SCAF11-215ENST00000551391 TPM4P67936 248 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 CCL20P78556 96 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 ZNF345Q14585 488 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 SURF2Q15527 256 aaPredicted RBP0.78□□□□□ -2.28
SCAF11-215ENST00000551391 COQ5Q5HYK3 327 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 SFXN4Q6P4A7 337 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 GID4Q8IVV7 300 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 C11orf40Q8WZ69 217 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 FAM96AQ9H5X1 160 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
SCAF11-215ENST00000551391 DLG5Q8TDM6 1919 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 INTS1Q8N201 2190 aaKnown RBP0.77□□□□□ -2.29
SCAF11-215ENST00000551391 IGKV2D-26A0A0A0MRZ7 120 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 FABP5P3A8MUU1 101 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 INMT-MINDY4F8WBC2 141 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 PMP2P02689 132 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 PRM2P04554 102 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 RNASE3P12724 160 aaKnown RBP0.77□□□□□ -2.29
SCAF11-215ENST00000551391 SUPT4H1P63272 117 aaKnown RBP0.77□□□□□ -2.29
SCAF11-215ENST00000551391 CTAG1AP78358 180 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.77□□□□□ -2.29
SCAF11-215ENST00000551391 C10orf67Q8IYJ2 551 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 C1orf158Q8N1D5 194 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 OR51I1Q9H343 314 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 XPNPEP1Q9NQW7 623 aa0.77□□□□□ -2.29
SCAF11-215ENST00000551391 MAST2Q6P0Q8 1798 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 EVC2Q86UK5 1308 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 TRBV20OR9-2A0A075B6H5 130 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 A0A0J9YY10 115 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 A0A1B0GX78 115 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 DCTN3O75935 186 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 OR5G3P0C626 314 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 RPS4Y1P22090 263 aaKnown RBP0.76□□□□□ -2.29
SCAF11-215ENST00000551391 MAGOHP61326 146 aaKnown RBP0.76□□□□□ -2.29
SCAF11-215ENST00000551391 STX5Q13190 355 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 GUK1Q16774 197 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 C12orf29Q8N999 325 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 OR5B17Q8NGF7 314 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 RASSF5Q8WWW0 418 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 REG4Q9BYZ8 158 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 HEATR5BQ9P2D3 2071 aa0.76□□□□□ -2.29
SCAF11-215ENST00000551391 SHBGP04278 402 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 UBBP0CG47 229 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 IFITM2Q01629 132 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 PMAIP1Q13794 54 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 COTL1Q14019 142 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 GRK1Q15835 563 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 DEFB115Q30KQ5 88 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 ALKAL1Q6UXT8 129 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 Q6ZS49 121 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms