RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 SRPXP78539 464 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 ASAH1Q13510 395 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 PPP1R1AQ13522 171 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 FAM219AQ8IW50 185 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 LGI3Q8N145 548 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 OR5B3Q8NH48 314 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 IL22RA2Q969J5 263 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 UBE2E2Q96LR5 201 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 TBC1D24Q9ULP9 559 aa12.63□□□□□ -0.39
CHMP1A-209ENST00000550872 A0A0B4J293 547 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 A0A0G2JRQ6 117 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 NPIPB5A8MRT5 1133 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 TCRBP04435 133 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 PSMB6P28072 239 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 SLC6A1P30531 599 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 RAB25P57735 213 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 UBE2MP61081 183 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 IFITM3Q01628 133 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 THOC7Q6I9Y2 204 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 SLC35G3Q8N808 338 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 OR10W1Q8NGF6 305 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 SRSF8Q9BRL6 282 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 GNB4Q9HAV0 340 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 NDUFA4L2Q9NRX3 87 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 ZNF257Q9Y2Q1 563 aa12.62□□□□□ -0.39
CHMP1A-209ENST00000550872 FAM240BA0A1B0GVZ2 78 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 IGLC7A0M8Q6 106 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 BRI3O95415 125 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 PF4P02776 101 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 PRH1P02810 166 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 REG1AP05451 166 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 ANXA7P20073 488 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 MECP2P51608 486 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 HSPE1P61604 102 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 TREML4Q6UXN2 200 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 C4orf3Q8WVX3 66 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 LSM10Q969L4 123 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 GPR146Q96CH1 333 aa12.61□□□□□ -0.39
CHMP1A-209ENST00000550872 PKD1L1Q8TDX9 2849 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 A0A0B4J2A0 478 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 C13orf42A0A1B0GVH6 325 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 C9orf170A2RU37 121 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 DHFRP00374 187 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 IGHV3-11P01762 117 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 CRYGCP07315 174 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 OR4E1P0C645 316 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 DEFA4P12838 97 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 CTRB1P17538 263 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 DEFA5Q01523 94 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 ANKRD55Q3KP44 614 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 C4orf46Q504U0 113 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 CTRB2Q6GPI1 263 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 Q6ZRM9 215 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 C19orf35Q6ZS72 473 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 LYZL2Q7Z4W2 148 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 HSD17B13Q7Z5P4 300 aaPredicted RBP12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 ZNF429Q86V71 674 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 PDCD10Q9BUL8 212 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 C20orf85Q9H1P6 137 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 SHPKQ9UHJ6 478 aa12.6□□□□□ -0.39
CHMP1A-209ENST00000550872 TRAV6A0A075B6T7 132 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 A0A0G2JLM5 398 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 IFNA17P01571 189 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 MYCNOSP40205 109 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 RHOGP84095 191 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 WT1-ASQ06250 92 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 DEFB136Q30KP8 78 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 LYG2Q86SG7 212 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 RAX2Q96IS3 184 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 DUX3Q96PT4 197 aa12.59□□□□□ -0.39
CHMP1A-209ENST00000550872 TRBV9A0A0B4J1U6 114 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 I3L521 148 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 CCL24O00175 119 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 OR2J3O76001 311 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 LGALS1P09382 135 aaKnown RBP12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 H2AFB2P0C5Z0 115 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 DEFA1P59665 94 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 DEFA3P59666 94 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 PRCDQ00LT1 54 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 RUNX1Q01196 453 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 ATP5G2Q06055 141 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 DHRS2Q13268 280 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 SPINK9Q5DT21 86 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 MRPL41Q8IXM3 137 aaKnown RBP12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 LRTM2Q8N967 370 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 ENKURQ8TC29 256 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 USMG5Q96IX5 58 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 ALX4Q9H161 411 aaPredicted RBP12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 PLEKHA3Q9HB20 300 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 NUDT15Q9NV35 164 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.4
CHMP1A-209ENST00000550872 NOTCH3Q9UM47 2321 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms