RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 OR1L8Q8NGR8 309 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 ABHD5Q8WTS1 349 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 FYTTD1Q96QD9 318 aaKnown RBP10.58□□□□□ -0.72
ERBB3-215ENST00000550828 COA4Q9NYJ1 87 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 CLPSL1A2RUU4 121 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 ACTL6BO94805 426 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 REG1AP05451 166 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 HSPE1P61604 102 aaKnown RBP10.57□□□□□ -0.72
ERBB3-215ENST00000550828 PRCDQ00LT1 54 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 WT1-ASQ06250 92 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 AWAT1Q58HT5 328 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 Q6ZNX1 250 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 ZNF329Q86UD4 541 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 KLHDC1Q8N7A1 406 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 ZBTB8BQ8NAP8 495 aaPredicted RBP10.57□□□□□ -0.72
ERBB3-215ENST00000550828 OR4D5Q8NGN0 318 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 OR5B3Q8NH48 314 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 COMMD5Q9GZQ3 224 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.57□□□□□ -0.72
ERBB3-215ENST00000550828 ZNF257Q9Y2Q1 563 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 RNF114Q9Y508 228 aa10.57□□□□□ -0.72
ERBB3-215ENST00000550828 GOSR2O14653 212 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 RBMXL2O75526 392 aaKnown RBP10.56□□□□□ -0.72
ERBB3-215ENST00000550828 TRAPPC2P0DI81 140 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 TRAPPC2BP0DI82 140 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 CXCL3P19876 107 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 H2BFSP57053 126 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 IL15RAQ13261 267 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 FCN2Q15485 313 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 IAH1Q2TAA2 248 aaPredicted RBP10.56□□□□□ -0.72
ERBB3-215ENST00000550828 PDLIM3Q53GG5 364 aaPredicted RBP10.56□□□□□ -0.72
ERBB3-215ENST00000550828 ARSJQ5FYB0 599 aaPredicted RBP10.56□□□□□ -0.72
ERBB3-215ENST00000550828 TCTEX1D4Q5JR98 221 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 UNQ5815/PRO19632Q6UWF5 114 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 OR11H7Q8NGC8 314 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 OR5M8Q8NGP6 311 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 HINT2Q9BX68 163 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 HSPB7Q9UBY9 170 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 DMRT1Q9Y5R6 373 aa10.56□□□□□ -0.72
ERBB3-215ENST00000550828 C13orf42A0A1B0GVH6 325 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 SSNA1O43805 119 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 IFNA21P01568 189 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 MFAP2P55001 183 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 DEFA5Q01523 94 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 SRSF4Q08170 494 aaKnown RBP10.55□□□□□ -0.72
ERBB3-215ENST00000550828 AKIRIN2Q53H80 203 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 OR5T1Q8NG75 326 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 OR52E5Q8NH55 327 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 OR1S1Q8NH92 325 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 WFDC12Q8WWY7 111 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 SPIN2AQ99865 258 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 SPIN2BQ9BPZ2 258 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 FKBP11Q9NYL4 201 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 MGAT4CQ9UBM8 478 aa10.55□□□□□ -0.72
ERBB3-215ENST00000550828 PIGBOS1A0A0B4J2F0 54 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 A0A1B0GVG6 124 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 A0A1W2PN81 502 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 PSMB11A5LHX3 300 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 FAM25EA8MYX2 175 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 IFNA17P01571 189 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 IGLV1-40P01703 118 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 IGHG4P01861 327 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 PRH1P02810 166 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 CTRB1P17538 263 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 CHRNA7P36544 502 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 SPCS3P61009 180 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 FOXL1Q12952 345 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 CTRB2Q6GPI1 263 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 THOC7Q6I9Y2 204 aaKnown RBP10.54□□□□□ -0.72
ERBB3-215ENST00000550828 FAM110DQ8TAY7 271 aaPredicted RBP10.54□□□□□ -0.72
ERBB3-215ENST00000550828 TMEM170AQ8WVE7 144 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 C2orf50Q96LR7 162 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 MAGT1Q9H0U3 335 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 KLK15Q9H2R5 256 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 RBKSQ9H477 322 aa10.54□□□□□ -0.72
ERBB3-215ENST00000550828 C5orf51A6NDU8 294 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 NPIPB5A8MRT5 1133 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 FBXO24O75426 580 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 TMEM50AO95807 157 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 MBPP02686 304 aaPredicted RBP10.53□□□□□ -0.72
ERBB3-215ENST00000550828 CRYGCP07315 174 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 OR13C7P0DN81 318 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 PSMB6P28072 239 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 RRAS2P62070 204 aaPredicted RBP10.53□□□□□ -0.72
ERBB3-215ENST00000550828 POLR2GP62487 172 aaKnown RBP eCLIP10.53□□□□□ -0.72
ERBB3-215ENST00000550828 ID3Q02535 119 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 KIAA0141Q14154 515 aaPredicted RBP10.53□□□□□ -0.72
ERBB3-215ENST00000550828 GSG1LQ6UXU4 331 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 TTC9CQ8N5M4 171 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 OR2C3Q8N628 320 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 FANCD2OSQ96PS1 177 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 SRSF8Q9BRL6 282 aaKnown RBP10.53□□□□□ -0.72
ERBB3-215ENST00000550828 C11orf1Q9H5F2 150 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 PLEKHA3Q9HB20 300 aa10.53□□□□□ -0.72
ERBB3-215ENST00000550828 RCL1Q9Y2P8 373 aaKnown RBP10.53□□□□□ -0.72
ERBB3-215ENST00000550828 FAM90A26D6RGX4 464 aa10.52□□□□□ -0.73
ERBB3-215ENST00000550828 INS-IGF2F8WCM5 200 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms