RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 HLA-DMBP28068 263 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 BRWD1-AS2P59051 145 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 RPL8P62917 257 aaKnown RBP7.62□□□□□ -1.19
VPS29-208ENST00000550267 TMEM187Q14656 261 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 C2orf76Q3KRA6 126 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 LAIR2Q6ISS4 152 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 Q6ZTC4 211 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 AHSA2Q719I0 299 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 Q8NAQ8 132 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 TCTEX1D2Q8WW35 142 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 CYGBQ8WWM9 190 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 FAM3DQ96BQ1 224 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 PSORS1C1Q9UIG5 152 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 RBMX2Q9Y388 322 aaKnown RBP7.62□□□□□ -1.19
VPS29-208ENST00000550267 HSPG2P98160 4391 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 TRAV10A0A0B4J240 114 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 IGKV1D-13A0A0B4J2D9 117 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 TMEM272A0A1B0GTI8 110 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 IGLC7A0M8Q6 106 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 NDUFA4O00483 81 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 MFNGO00587 321 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 RBMY1A1P0DJD3 496 aaKnown RBP7.61□□□□□ -1.19
VPS29-208ENST00000550267 RBMY1CP0DJD4 496 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 IGKV1-13P0DP09 117 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 CD36P16671 472 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 OR2B8PP59922 312 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 IRF3Q14653 427 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 RBMY1FQ15415 496 aaKnown RBP7.61□□□□□ -1.19
VPS29-208ENST00000550267 NR2C2APQ86WQ0 139 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 PQLC1Q8N2U9 271 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 GPHA2Q96T91 129 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 RNF2Q99496 336 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 CHRDL1Q9BU40 450 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 HRH4Q9H3N8 390 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 SPATA2Q9UM82 520 aa7.61□□□□□ -1.19
VPS29-208ENST00000550267 IGHV3-21A0A0B4J1V1 117 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 IGHV4-28A0A0C4DH34 117 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 K7EMT4 169 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 HLA-DQB1P01920 261 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 HIST1H1DP16402 221 aaKnown RBP7.6□□□□□ -1.19
VPS29-208ENST00000550267 NFYAP23511 347 aaPredicted RBP7.6□□□□□ -1.19
VPS29-208ENST00000550267 CMC4P56277 68 aaPredicted RBP7.6□□□□□ -1.19
VPS29-208ENST00000550267 EIF4EBP1Q13541 118 aaPredicted RBP7.6□□□□□ -1.19
VPS29-208ENST00000550267 TIMM50Q3ZCQ8 353 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 PVRIGQ6DKI7 326 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 POM121L12Q8N7R1 296 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 OR10R2Q8NGX6 335 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 VN1R17PQ8TDU5 208 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 TMEM203Q969S6 136 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 HSD17B10Q99714 261 aaKnown RBP7.6□□□□□ -1.19
VPS29-208ENST00000550267 S100A14Q9HCY8 104 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 THYN1Q9P016 225 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 SMPXQ9UHP9 88 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 ELF5Q9UKW6 265 aaPredicted RBP7.6□□□□□ -1.19
VPS29-208ENST00000550267 RAB22AQ9UL26 194 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 OR2W1Q9Y3N9 320 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 ETV7Q9Y603 341 aa7.6□□□□□ -1.19
VPS29-208ENST00000550267 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 TRAV3A0A0B4J244 114 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 CHEK1O14757 476 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 MRPS14O60783 128 aaKnown RBP7.59□□□□□ -1.19
VPS29-208ENST00000550267 HRASP01112 189 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 GADD45AP24522 165 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 TALDO1P37837 337 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 HES5Q5TA89 166 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 TMEM91Q6ZNR0 172 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 Q6ZS49 121 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 GBGT1Q8N5D6 347 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 BPIFB6Q8NFQ5 453 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 OR10W1Q8NGF6 305 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 BSCL2Q96G97 398 aaPredicted RBP7.59□□□□□ -1.19
VPS29-208ENST00000550267 ZNF414Q96IQ9 312 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 RNF126Q9BV68 326 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 RHPN1-AS1Q9BWJ2 59 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 HRASLSQ9HDD0 168 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 BET1LQ9NYM9 111 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 TAS2R8Q9NYW2 309 aa7.59□□□□□ -1.19
VPS29-208ENST00000550267 IGHV7-4-1A0A0J9YVY3 117 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 C15orf61A6NNL5 157 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 SLC22A5O76082 557 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 P0DMU3 169 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 FAM231AP0DMU4 169 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 FAM231CP0DMU5 169 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 LIPKQ5VXJ0 399 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 LEMD1Q68G75 181 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 SLC25A24Q6NUK1 477 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 SPSB3Q6PJ21 355 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 ZNF767PQ75MW2 155 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 UBAC2Q8NBM4 344 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 TMEM116Q8NCL8 245 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 CENPOQ9BU64 300 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 MND1Q9BWT6 205 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 PLCXD1Q9NUJ7 323 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 FKBP14Q9NWM8 211 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 C21orf62Q9NYP8 219 aa7.58□□□□□ -1.2
VPS29-208ENST00000550267 LSM2Q9Y333 95 aaKnown RBP7.58□□□□□ -1.2
VPS29-208ENST00000550267 MUC4Q99102 2169 aa7.57□□□□□ -1.2
VPS29-208ENST00000550267 IGLV2-18A0A075B6J9 118 aa7.57□□□□□ -1.2
VPS29-208ENST00000550267 C15orf62A8K5M9 175 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms