RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PFN1P07737 140 aaKnown RBP8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 FAM201AQ5SY85 155 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 FOXL2NBQ6ZUU3 175 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 PERPQ96FX8 193 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 OR8B2Q96RD0 313 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 KIAA1549LQ6ZVL6 1849 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 TRBV9A0A0B4J1U6 114 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 TEX50A0A1B0GTY4 177 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 ETV2O00321 342 aaPredicted RBP8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 OR9G9P0C7N8 305 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 MAS1LP35410 378 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 GNB2P62879 340 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 OR8A1Q8NGG7 326 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 FAM122AQ96E09 287 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 RNF115Q9Y4L5 304 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 K7ESF4 209 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 LEPROTL1O95214 131 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 LGALS4P56470 323 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 ZNF726P1Q15940 193 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 SRSF7Q16629 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 ST6GALNAC6Q969X2 333 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 IFITM10A6NMD0 228 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 RPL8P62917 257 aaKnown RBP8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 KRTCAP3Q53RY4 240 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 OR4A47Q6IF82 309 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 BEND2Q8NDZ0 799 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 PGLYRP4Q96LB8 373 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 PRDM13Q9H4Q3 707 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 GNB4Q9HAV0 340 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 ASCL3Q9NQ33 180 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 KIF26AQ9ULI4 1882 aaPredicted RBP8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 ZNF585BQ52M93 769 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 C1orf194Q5T5A4 169 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 ERASQ7Z444 233 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 NPIPB3Q92617 1050 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 RPEQ96AT9 228 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 PARD6GQ9BYG4 376 aaPredicted RBP8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 YTHDF2Q9Y5A9 579 aaKnown RBP8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 A0A1W2PRD5 423 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 A0A1W2PRF3 423 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 A0A1W2PRM7 423 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 FOXI3A8MTJ6 420 aaPredicted RBP8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 FAM87AP0C7U9 286 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 TIMP3P35625 211 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 ACTL10Q5JWF8 245 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 PRNTQ86SH4 94 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 STXBP6Q8NFX7 210 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 EAF1Q96JC9 268 aaPredicted RBP8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 MRPL37Q9BZE1 423 aaKnown RBP8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 PCDH15Q96QU1 1955 aa8.55□□□□□ -1.04
SMARCC2-209ENST00000550164 PPIHO43447 177 aaKnown RBP8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 REG1AP05451 166 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 NTF4P34130 210 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 LEMD1Q68G75 181 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 C19orf35Q6ZS72 473 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 OR8B3Q8NGG8 313 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 SEMA5BQ9P283 1151 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 CA1P00915 261 aaPredicted RBP8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 GPR6P46095 362 aaPredicted RBP8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 MMDQ15546 238 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 TMEM177Q53S58 311 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 TMEM108Q6UXF1 575 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 Q6ZS49 121 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 GTF2H5Q6ZYL4 71 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 BPIFA4PQ86YQ2 179 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 FAM222BQ8WU58 562 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 LNP1A1A4G5 178 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 HYPMO75409 117 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 CECR9P0C854 216 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 RELBQ01201 579 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 EFNB3Q15768 340 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 AGMATQ9BSE5 352 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 NDFIP1Q9BT67 221 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 LAMTOR2Q9Y2Q5 125 aa8.54□□□□□ -1.04
SMARCC2-209ENST00000550164 LOC389332A0A1B0GUA5 103 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 IGKV1D-33P01593 117 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 IGKV1-33P01594 117 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 UQCRFS1P47985 274 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 B3GALT5-AS1P59052 145 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 DEFB123Q8N688 67 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 GCSAMQ8N6F7 178 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 ZNF430Q9H8G1 570 aaPredicted RBP8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 ELOVL5Q9NYP7 299 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 SLC25A10Q9UBX3 287 aaPredicted RBP8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 FAM157AC9JC47 383 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 IFNL4K9M1U5 179 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 SLC25A17O43808 307 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 IGLV3-1P01715 115 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 RPL24P83731 157 aaKnown RBP8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 FOXF2Q12947 444 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 ZNF146Q15072 292 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 SPATA31B1PQ5VZV4 182 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 SFXN3Q9BWM7 321 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 GGTLC1Q9BX51 225 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 HSPB8Q9UJY1 196 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 ABCA4P78363 2273 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 J3QW42 95 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms