RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 RAB3BP20337 219 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 TAS2R31P59538 309 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 TIMM50Q3ZCQ8 353 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 PRSS48Q7RTY5 328 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 HSD17B13Q7Z5P4 300 aaPredicted RBP7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 C11orf45Q8TAV5 145 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 BSCL2Q96G97 398 aaPredicted RBP7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 RARRES2Q99969 163 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 COMMD5Q9GZQ3 224 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 C6orf62Q9GZU0 229 aaPredicted RBP7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 VCXQ9H320 206 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 HRASLSQ9HDD0 168 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 ETV7Q9Y603 341 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 DNAH10Q8IVF4 4471 aa7.24□□□□□ -1.25
TRAFD1-207ENST00000550051 TRDV1A0A1B0GX56 115 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 C15orf62A8K5M9 175 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 MPTX1A8MV57 137 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 SSX5O60225 188 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 HPRT1P00492 218 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 RPA2P15927 270 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 NQO2P16083 231 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 FCGR2BP31994 310 aaPredicted RBP7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 RBMS2Q15434 407 aaKnown RBP7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 THOC7Q6I9Y2 204 aaKnown RBP7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 SPAG16Q8N0X2 631 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 CADM3Q8N126 398 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 GDPD1Q8N9F7 314 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 OR5B3Q8NH48 314 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 C2CD4CQ8TF44 421 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 GPHA2Q96T91 129 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 QTRT1Q9BXR0 403 aaKnown RBP7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 C11orf68Q9H3H3 251 aaKnown RBP7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 CCL28Q9NRJ3 127 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 SMPXQ9UHP9 88 aa7.23□□□□□ -1.25
TRAFD1-207ENST00000550051 TRAV3A0A0B4J244 114 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 TEX50A0A1B0GTY4 177 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 OR2T8A6NH00 312 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 SCGNO76038 276 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 CTSDP07339 412 aaPredicted RBP7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 TRAPPC2P0DI81 140 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 TRAPPC2BP0DI82 140 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 MYL9P24844 172 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 NANOS2P60321 138 aaKnown RBP7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 WT1-ASQ06250 92 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 SLC25A24Q6NUK1 477 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 ZNF773Q6PK81 442 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 NR2C2APQ86WQ0 139 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 APRG1Q8IVJ8 170 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 OR10W1Q8NGF6 305 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 OR11H2Q8NH07 326 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 CD300LFQ8TDQ1 290 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 SCARB1Q8WTV0 552 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 CHRDL1Q9BU40 450 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 CCDC90BQ9GZT6 254 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 PLEKHA2Q9HB19 425 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 HECTD4Q9Y4D8 3996 aa7.22□□□□□ -1.25
TRAFD1-207ENST00000550051 TMEM235A6NFC5 223 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 SULT1C2O00338 296 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 CHEK1O14757 476 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 TNFSF12O43508 249 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 CTSGP08311 255 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 OR13C7P0DN81 318 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 FCGR2CP31995 323 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 MFAP2P55001 183 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 FAM90A2PQ658T7 463 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 OR1L8Q8NGR8 309 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 NUDCD2Q8WVJ2 157 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 SECTM1Q8WVN6 248 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 ZNF414Q96IQ9 312 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 OR10C1Q96KK4 312 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 C20orf24Q9BUV8 137 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 NDUFA4L2Q9NRX3 87 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 NDUFB11Q9NX14 153 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 C21orf62Q9NYP8 219 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 APLNQ9ULZ1 77 aa7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 F11RQ9Y624 299 aaKnown RBP7.21□□□□□ -1.26
TRAFD1-207ENST00000550051 VPS13DQ5THJ4 4388 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 IGHV7-4-1A0A0J9YVY3 117 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 NOTOA8MTQ0 251 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 C11orf94C9JXX5 98 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 K7EIM0 57 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 MRPS14O60783 128 aaKnown RBP7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 PPYP01298 95 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 GNG2P59768 71 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 CATR1Q13166 79 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 TBCEQ15813 527 aaPredicted RBP7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 ZNF124Q15973 351 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 LINC00336Q6ZUF6 198 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 ZNF367Q7RTV3 350 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 HOGA1Q86XE5 327 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 GVQW1Q8N7I0 195 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 TMEM116Q8NCL8 245 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 BEST4Q8NFU0 473 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 OR13F1Q8NGS4 319 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 GIMAP1Q8WWP7 306 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 DGCR14Q96DF8 476 aaKnown RBP7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 RNF2Q99496 336 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 RHPN1-AS1Q9BWJ2 59 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 SLC5A7Q9GZV3 580 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 HRH4Q9H3N8 390 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms