RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ASCL2Q99929 193 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 PSMG3Q9BT73 122 aaPredicted RBP11.77□□□□□ -0.53
CACNB3-209ENST00000548860 DMRT1Q9Y5R6 373 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 IGHV3OR16-8A0A075B7F1 116 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 ELOA3CA0A087WX78 387 aaPredicted RBP11.77□□□□□ -0.53
CACNB3-209ENST00000548860 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 NKX6-3A6NJ46 265 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 SLC25A17O43808 307 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 RBP4P02753 201 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 ADH4P08319 380 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 IL6RP08887 468 aaPredicted RBP11.77□□□□□ -0.53
CACNB3-209ENST00000548860 FOLR2P14207 255 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 CD24P25063 80 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 RNASEKQ6P5S7 137 aaKnown RBP11.77□□□□□ -0.53
CACNB3-209ENST00000548860 TGIF2LXQ8IUE1 241 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 OR9G1Q8NH87 305 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 OR2T6Q8NHC8 308 aa11.77□□□□□ -0.53
CACNB3-209ENST00000548860 FLYWCH2Q96CP2 140 aaKnown RBP11.77□□□□□ -0.53
CACNB3-209ENST00000548860 TMEM210A6NLX4 147 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 OR4A47Q6IF82 309 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 ST6GALNAC3Q8NDV1 305 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 HES4Q9HCC6 221 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 ATMQ13315 3056 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 ZFHX4Q86UP3 3567 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 ACACBO00763 2458 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 FOXC1Q12948 553 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 TNXAQ16473 311 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 KRTCAP3Q53RY4 240 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 LEMD1Q68G75 181 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 OR2D3Q8NGH3 330 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 IGFBPL1Q8WX77 278 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 DCHS1Q96JQ0 3298 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 PTPRQQ9UMZ3 2332 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 IGHV2-5P01817 119 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 DUTP33316 252 aaKnown RBP11.76□□□□□ -0.53
CACNB3-209ENST00000548860 PKIAP61925 76 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 IQCJQ1A5X6 159 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 MORN2Q502X0 79 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 BORCS7Q96B45 105 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 LINC00479Q96M42 142 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 SAA2-SAA4A0A096LPE2 208 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 SLC25A5P05141 298 aaKnown RBP11.76□□□□□ -0.53
CACNB3-209ENST00000548860 OR4A8P0C604 315 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 SAA2P0DJI9 122 aaPredicted RBP11.76□□□□□ -0.53
CACNB3-209ENST00000548860 ERASQ7Z444 233 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 SFRP2Q96HF1 295 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 HSPB7Q9UBY9 170 aa11.76□□□□□ -0.53
CACNB3-209ENST00000548860 LAMA5O15230 3695 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 TMSB15BA0A087X1C1 80 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 IQCF6A8MYZ5 107 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 CXorf1O96002 111 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 NUBP1P53384 320 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 NPIPB3Q92617 1050 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 PTPN13Q12923 2485 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 C10orf142B7Z368 130 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 HSBP1O75506 76 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 DAZAP2Q15038 168 aaPredicted RBP11.75□□□□□ -0.53
CACNB3-209ENST00000548860 NABP2Q9BQ15 211 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 MRPL18Q9H0U6 180 aaKnown RBP11.75□□□□□ -0.53
CACNB3-209ENST00000548860 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 GPX4P36969 197 aaPredicted RBP11.75□□□□□ -0.53
CACNB3-209ENST00000548860 MFAP2P55001 183 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 ZNF146Q15072 292 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 C22orf15Q8WYQ4 148 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 WNT10AQ9GZT5 417 aa11.75□□□□□ -0.53
CACNB3-209ENST00000548860 IGKV1-16P04430 117 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 LINC00869P0C866 280 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-209ENST00000548860 GCHFRP30047 84 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 GPR6P46095 362 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-209ENST00000548860 TREML4Q6UXN2 200 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 TMEM14EPQ6UXP3 125 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 GCSAMQ8N6F7 178 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 MDS2Q8NDY4 140 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 P2RX4Q99571 388 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 VAMP8Q9BV40 100 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 SLC25A10Q9UBX3 287 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-209ENST00000548860 IGKV1D-17A0A075B6S4 117 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 TCAPO15273 167 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 PYYP10082 97 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
CACNB3-209ENST00000548860 RAB4AP20338 218 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 ZNF134P52741 427 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 CENPWQ5EE01 88 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 TMEM183AQ8IXX5 376 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 ZBTB34Q8NCN2 500 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 ANAPC16Q96DE5 110 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 MRPL37Q9BZE1 423 aaKnown RBP11.74□□□□□ -0.53
CACNB3-209ENST00000548860 SETD2Q9BYW2 2564 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-209ENST00000548860 C15orf62A8K5M9 175 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 TIMP3P35625 211 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 FOXA3P55318 350 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms