RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CDC42EP3Q9UKI2 254 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 PROP1O75360 226 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 NPY1RP25929 384 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 ABHD17BQ5VST6 288 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 STUMQ69YW2 141 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 TRAT1Q6PIZ9 186 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 ATOH7Q8N100 152 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 DCTN5Q9BTE1 182 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 GNG12Q9UBI6 72 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 SLC25A10Q9UBX3 287 aaPredicted RBP11.72□□□□□ -0.53
SRP54-202ENST00000546080 USF3Q68DE3 2245 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 C15orf65H3BRN8 121 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 APCSP02743 223 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 IGFBP2P18065 325 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 HINT1P49773 126 aaPredicted RBP11.72□□□□□ -0.53
SRP54-202ENST00000546080 KLF3P57682 345 aaPredicted RBP11.72□□□□□ -0.53
SRP54-202ENST00000546080 EDDM3AQ14507 147 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 ANKRD39Q53RE8 183 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 IBA57Q5T440 356 aaKnown RBP11.72□□□□□ -0.53
SRP54-202ENST00000546080 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 S1PR3Q99500 378 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 SERTAD4Q9NUC0 356 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 PCSK5Q92824 1860 aa11.72□□□□□ -0.53
SRP54-202ENST00000546080 ISLRO14498 428 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 MGST1P10620 155 aaKnown RBP11.71□□□□□ -0.53
SRP54-202ENST00000546080 TSPOP30536 169 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 MPV17P39210 176 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 DUSP3P51452 185 aaPredicted RBP11.71□□□□□ -0.53
SRP54-202ENST00000546080 PRR20EP86478 221 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 PRR20CP86479 221 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 PRR20DP86480 221 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 PRR20BP86481 221 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 PRR20AP86496 221 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 PMCHL1Q16048 86 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 C11orf53Q8IXP5 236 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 ZNF439Q8NDP4 499 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 RNASE8Q8TDE3 154 aaKnown RBP11.71□□□□□ -0.53
SRP54-202ENST00000546080 BET1LQ9NYM9 111 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 PILRBQ9UKJ0 227 aa11.71□□□□□ -0.53
SRP54-202ENST00000546080 PI4KAP42356 2102 aa11.71□□□□□ -0.54
SRP54-202ENST00000546080 TMEM265A0A087WTH1 108 aa11.71□□□□□ -0.54
SRP54-202ENST00000546080 RPL39P5Q59GN2 51 aa11.71□□□□□ -0.54
SRP54-202ENST00000546080 C6orf15Q6UXA7 325 aaPredicted RBP11.71□□□□□ -0.54
SRP54-202ENST00000546080 CORO2AQ92828 525 aa11.71□□□□□ -0.54
SRP54-202ENST00000546080 CXXC4Q9H2H0 198 aa11.71□□□□□ -0.54
SRP54-202ENST00000546080 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.54
SRP54-202ENST00000546080 PLEKHA3Q9HB20 300 aa11.71□□□□□ -0.54
SRP54-202ENST00000546080 ENY2Q9NPA8 101 aa11.71□□□□□ -0.54
SRP54-202ENST00000546080 MRPS16Q9Y3D3 137 aaKnown RBP11.71□□□□□ -0.54
SRP54-202ENST00000546080 SMIM27A0A1W2PRY6 76 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 NKX6-3A6NJ46 265 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 USF1P22415 310 aaPredicted RBP11.7□□□□□ -0.54
SRP54-202ENST00000546080 SMIM21Q3B7S5 101 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 WDR82Q6UXN9 313 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 ZNF738Q8NE65 137 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 KLF14Q8TD94 323 aaPredicted RBP11.7□□□□□ -0.54
SRP54-202ENST00000546080 C22orf15Q8WYQ4 148 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 GCM1Q9NP62 436 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 ZNF331Q9NQX6 463 aaPredicted RBP11.7□□□□□ -0.54
SRP54-202ENST00000546080 MRPL27Q9P0M9 148 aaKnown RBP11.7□□□□□ -0.54
SRP54-202ENST00000546080 ABI3Q9P2A4 366 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 COX11Q9Y6N1 276 aa11.7□□□□□ -0.54
SRP54-202ENST00000546080 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 OR7C2O60412 319 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 UBE2V1Q13404 147 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 MORN2Q502X0 79 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 TIPARPQ7Z3E1 657 aaKnown RBP11.69□□□□□ -0.54
SRP54-202ENST00000546080 OR5B3Q8NH48 314 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 FAM216AQ8WUB2 273 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 TECRQ9NZ01 308 aaKnown RBP11.69□□□□□ -0.54
SRP54-202ENST00000546080 JPT1Q9UK76 154 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 PTPRBP23467 1997 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 TOMM40O96008 361 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 LINC00869P0C866 280 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 KIR2DS2P43631 304 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 RBX1P62877 108 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 PMS2CLQ68D20 193 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 C18orf32Q8TCD1 76 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 NABP2Q9BQ15 211 aa11.69□□□□□ -0.54
SRP54-202ENST00000546080 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 IGHV3-13P01766 116 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 IGHV3-7P01780 117 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 SELENOVP59797 346 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 LCN12Q6JVE5 192 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 Q6ZVH6 145 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 OR4S2Q8NH73 311 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 FREM2Q5SZK8 3169 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 AHRRA9YTQ3 701 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 GGTLC3B5MD39 225 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 HSBP1O75506 76 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 IGLV2-8P01709 118 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 PPOXP50336 477 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 SLAQ13239 276 aa11.68□□□□□ -0.54
SRP54-202ENST00000546080 LINC00696Q6ZRV3 163 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms