RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 TMEM133Q9H2Q1 129 aa1.75□□□□□ -2.13
SNHG1-224ENST00000545688 LINC00574Q9H8X3 128 aa1.75□□□□□ -2.13
SNHG1-224ENST00000545688 NMNAT1Q9HAN9 279 aaPredicted RBP1.75□□□□□ -2.13
SNHG1-224ENST00000545688 MRPL22Q9NWU5 206 aaKnown RBP1.75□□□□□ -2.13
SNHG1-224ENST00000545688 RASL12Q9NYN1 266 aa1.75□□□□□ -2.13
SNHG1-224ENST00000545688 PIPOXQ9P0Z9 390 aa1.75□□□□□ -2.13
SNHG1-224ENST00000545688 KLK5Q9Y337 293 aaPredicted RBP1.75□□□□□ -2.13
SNHG1-224ENST00000545688 MPC1Q9Y5U8 109 aa1.75□□□□□ -2.13
SNHG1-224ENST00000545688 LINC00312Q9Y6C7 94 aa1.75□□□□□ -2.13
SNHG1-224ENST00000545688 DSCAML1Q8TD84 2053 aa1.75□□□□□ -2.13
SNHG1-224ENST00000545688 A0A0U1RQV1 116 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 IZUMO1RA6ND01 250 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 ARRDC5A6NEK1 342 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 LINC01619G3V211 115 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 KPNA4O00629 521 aaPredicted RBP1.74□□□□□ -2.13
SNHG1-224ENST00000545688 XRCC2O43543 280 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 SLC16A7O60669 478 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 SERPINB7O75635 380 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 IGLV3-1P01715 115 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 HSMCR30P0CW71 290 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 CGB3P0DN86 165 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 CGB7P0DN87 165 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 ERP29P30040 261 aaKnown RBP1.74□□□□□ -2.13
SNHG1-224ENST00000545688 VHLP40337 213 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 GABRA2P47869 451 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 PPT1P50897 306 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 GZMMP51124 257 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 RAB9AP51151 201 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 DIAPH2-AS1Q14236 149 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 RBMY1FQ15415 496 aaKnown RBP1.74□□□□□ -2.13
SNHG1-224ENST00000545688 HLA-DRB5Q30154 266 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 LGALS9BQ3B8N2 356 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 TEX30Q5JUR7 227 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 C8orf74Q6P047 294 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 HEPN1Q6WQI6 88 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 TRMT10CQ7L0Y3 403 aaKnown RBP1.74□□□□□ -2.13
SNHG1-224ENST00000545688 TGIF2LXQ8IUE1 241 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 PUSL1Q8N0Z8 303 aaKnown RBP1.74□□□□□ -2.13
SNHG1-224ENST00000545688 ZNF645Q8N7E2 425 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 TMEM104Q8NE00 496 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 OR8S1Q8NH09 359 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 NDNFQ8TB73 568 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 CIRBP-AS1Q8TBR5 109 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 AGR3Q8TD06 166 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 STMN2Q93045 179 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 KCTD7Q96MP8 289 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 ZNF714Q96N38 554 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 FMO2Q99518 471 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 RARRES2Q99969 163 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 SLC25A2Q9BXI2 301 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 GON7Q9BXV9 100 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 ALX4Q9H161 411 aaPredicted RBP1.74□□□□□ -2.13
SNHG1-224ENST00000545688 CACYBPQ9HB71 228 aaKnown RBP1.74□□□□□ -2.13
SNHG1-224ENST00000545688 ZNF286AQ9HBT8 521 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 VAPAQ9P0L0 249 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 PSMC3IPQ9P2W1 217 aaPredicted RBP1.74□□□□□ -2.13
SNHG1-224ENST00000545688 CD300AQ9UGN4 299 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 PYCARDQ9ULZ3 195 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 SIGLEC7Q9Y286 467 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 TP53TG1Q9Y2A0 90 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 MED31Q9Y3C7 131 aa1.74□□□□□ -2.13
SNHG1-224ENST00000545688 TRAV27A0A087WT01 109 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 A0A0B4J2A0 478 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 A0A1W2PNN7 141 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 hADV38S2A0JD32 116 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 C5orf58C9J3I9 102 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 H0Y980 276 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 COPEO14579 308 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 FFAR1O14842 300 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 ARPC3O15145 178 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 SOX15O60248 233 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 YIF1AO95070 293 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 IGKV1D-33P01593 117 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 IGKV1-33P01594 117 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 HLA-DQA1P01909 254 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 BPGMP07738 259 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 LGALS1P09382 135 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 INAFM2P0DMQ5 153 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 SLC2A1P11166 492 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 IDO1P14902 403 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 CFL1P23528 166 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 CRABP1P29762 137 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 HRH1P35367 487 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 RPL14P50914 215 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 POLR2JP52435 117 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 GNG3P63215 75 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 PRDX4Q13162 271 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 DYNC1I2Q13409 638 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 KRR1Q13601 381 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 SNCBQ16143 134 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 CEACAM21Q3KPI0 293 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 TMEM42Q69YG0 159 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 Q6ZSR3 168 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 LYG2Q86SG7 212 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 OAFQ86UD1 273 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 C4orf33Q8N1A6 199 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 Q8N402 240 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 ZNF676Q8N7Q3 588 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 EIF1ADQ8N9N8 165 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 OR52L1Q8NGH7 329 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms