RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 NUDCD2Q8WVJ2 157 aa11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 FCAMRQ8WWV6 532 aa11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 ABHD14BQ96IU4 210 aa11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 TMEM68Q96MH6 324 aa11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 YPEL2Q96QA6 119 aa11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 TSNAXQ99598 290 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 HDHD3Q9BSH5 251 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 CSTL1Q9H114 145 aa11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 PTTG2Q9NZH5 202 aa11.19□□□□□ -0.62
CLSTN3-216ENST00000545663 HMCN2Q8NDA2 5059 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 TRAV10A0A0B4J240 114 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 GABARAPH6UMI1 98 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 TUSC2O75896 110 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 IGHV3-23P01764 117 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 TBPP20226 339 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 RCVRNP35243 200 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 ETV6P41212 452 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 ARPC4P59998 168 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 IL18Q14116 193 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 MRGPRG-AS1Q2M3A8 158 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 GPHB5Q86YW7 130 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 SNX29P2Q8IUI4 249 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 APRG1Q8IVJ8 170 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 BEST4Q8NFU0 473 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 OR10J5Q8NHC4 309 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 GPX8Q8TED1 209 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 IL1F10Q8WWZ1 152 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 GALNT14Q96FL9 552 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 CHRDL1Q9BU40 450 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 RNF126Q9BV68 326 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 TAS2R8Q9NYW2 309 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 ANXA10Q9UJ72 324 aa11.18□□□□□ -0.62
CLSTN3-216ENST00000545663 TRBV9A0A0B4J1U6 114 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 TRAV25A0A0B4J276 109 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 FAM223BA6NKX1 122 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 MPTX1A8MV57 137 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 RAB29O14966 203 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 PROP1O75360 226 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 SPDEFO95238 335 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 IGLV2-23P01705 113 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 CRYGBP07316 175 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 OR9G9P0C7N8 305 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 RBMY1CP0DJD4 496 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 CNPY1Q3B7I2 92 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 FAM71F2Q6NXP2 309 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 Q6ZRM9 215 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 FAM223AQ8IWN6 122 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 PHB2Q99623 299 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 GINS4Q9BRT9 223 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 CABLES2Q9BTV7 478 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 S4R3C0 116 aa11.17□□□□□ -0.62
CLSTN3-216ENST00000545663 SSX5O60225 188 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 NAT1P18440 290 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 C15orf32Q32M92 178 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 ZNF585BQ52M93 769 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 CCDC190Q86UF4 302 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 ZNF383Q8NA42 475 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 OR5AP2Q8NGF4 316 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 CD300LFQ8TDQ1 290 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 SMIM4Q8WVI0 70 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 DEDD2Q8WXF8 326 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 SOSTQ9BQB4 213 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 HRH4Q9H3N8 390 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 PIPOXQ9P0Z9 390 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 MTFP1Q9UDX5 166 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 ANAPC10Q9UM13 185 aa11.16□□□□□ -0.62
CLSTN3-216ENST00000545663 TRBV6-7A0A0A0MS04 114 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 A8MWP6 167 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 GSTZ1O43708 216 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 OR2J3O76001 311 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 SLC22A5O76082 557 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 IFNA10P01566 189 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 SCTP09683 121 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 GSTT2BP0CG30 244 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 CEACAM6P40199 344 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 UNQ9165/PRO28630Q6UXU0 137 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 C19orf35Q6ZS72 473 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 S100ZQ8WXG8 99 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 BORCS5Q969J3 196 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 ABHD1Q96SE0 405 aa11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 ELF5Q9UKW6 265 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-216ENST00000545663 GSTT2P0CG29 244 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 C8orf88P0DMB2 117 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 AP3S2P59780 193 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 CLEC19AQ6UXS0 136 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 ZNF767PQ75MW2 155 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 TMEM17Q86X19 198 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 GDPD1Q8N9F7 314 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 Q8NAQ8 132 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 OR5H2Q8NGV7 314 aa11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-216ENST00000545663 AGRNO00468 2067 aa11.13□□□□□ -0.63
CLSTN3-216ENST00000545663 BET1O15155 118 aa11.13□□□□□ -0.63
CLSTN3-216ENST00000545663 AMBPP02760 352 aa11.13□□□□□ -0.63
CLSTN3-216ENST00000545663 ARL3P36405 182 aa11.13□□□□□ -0.63
CLSTN3-216ENST00000545663 TAS2R19P59542 299 aa11.13□□□□□ -0.63
CLSTN3-216ENST00000545663 CDK10Q15131 360 aa11.13□□□□□ -0.63
CLSTN3-216ENST00000545663 FAM106AQ4KMX7 169 aa11.13□□□□□ -0.63
CLSTN3-216ENST00000545663 PYDC2Q56P42 97 aa11.13□□□□□ -0.63
CLSTN3-216ENST00000545663 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms