RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 CHTOPQ9Y3Y2 248 aaKnown RBP8.84□□□□□ -0.99
PCDH9-204ENST00000544246 VWC2LB2RUY7 222 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 M0R2P5 195 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 ZNHIT1O43257 154 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 FHL5Q5TD97 284 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 SFTA2Q6UW10 78 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 IMMP2LQ96T52 175 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 CGAP01215 116 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 SRSF1Q07955 248 aaKnown RBP eCLIP8.84□□□□□ -0.99
PCDH9-204ENST00000544246 ZNF48Q96MX3 618 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-204ENST00000544246 LRRC37AA6NMS7 1700 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 SPINT1O43278 529 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 DPM2O94777 84 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 CD28P10747 220 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 RPL32P62910 135 aaKnown RBP8.84□□□□□ -0.99
PCDH9-204ENST00000544246 TMEM155Q4W5P6 130 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 ZFAND6Q6FIF0 208 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 SLC25A47Q6Q0C1 308 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 UBE2DNLQ8IWF7 75 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 RFLNBQ8N5W9 214 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 RPRMQ9NS64 109 aa8.84□□□□□ -0.99
PCDH9-204ENST00000544246 NGFRP08138 427 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 LINC00158P58513 81 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 LAMB1P07942 1786 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 ADARB2-AS1A8MUL3 147 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 EGR1P18146 543 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 SNAI3Q3KNW1 292 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 FGF11Q92914 225 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 A0A1W2PRX2 142 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 KLF14Q8TD94 323 aaPredicted RBP8.83□□□□□ -1
PCDH9-204ENST00000544246 GPHA2Q96T91 129 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 VKORC1Q9BQB6 163 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 SCO2A0A1W2PP80 73 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 CLEC19AQ6UXS0 136 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 GATD1Q8NB37 220 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 MGST2Q99735 147 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 B9A039 149 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 HLA-DQB1P01920 261 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 CD7P09564 240 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 RTN4RL2Q86UN3 420 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 SP7Q8TDD2 431 aaPredicted RBP8.83□□□□□ -1
PCDH9-204ENST00000544246 DUSP15Q9H1R2 295 aaPredicted RBP8.83□□□□□ -1
PCDH9-204ENST00000544246 C5orf66Q9H5L9 145 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 LAMTOR3Q9UHA4 124 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 DTX4Q9Y2E6 619 aa8.83□□□□□ -1
PCDH9-204ENST00000544246 FHITP49789 147 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 FBLN7Q53RD9 439 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 DRAM1Q8N682 238 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 ARPC1AQ92747 370 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 SIRT4Q9Y6E7 314 aaPredicted RBP8.82□□□□□ -1
PCDH9-204ENST00000544246 S4R3C0 116 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 TRGV4A0A0C4DH28 118 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 MORN3Q6PF18 240 aaPredicted RBP8.82□□□□□ -1
PCDH9-204ENST00000544246 OR52E5Q8NH55 327 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 ORAOV1Q8WV07 137 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 Q9H3A6 140 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 JPT2Q9H910 190 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 LAMTOR2Q9Y2Q5 125 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 ARAP2Q8WZ64 1704 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 MCM3APO60318 1980 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 IGKV1D-16P01601 117 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 GFI1BQ5VTD9 330 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 POC1AQ8NBT0 407 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 TMEM167AQ8TBQ9 72 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 JMJD8Q96S16 334 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 C21orf62Q9NYP8 219 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 SBF1O95248 1867 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 C1orf162Q8NEQ5 155 aaPredicted RBP8.82□□□□□ -1
PCDH9-204ENST00000544246 PRDM13Q9H4Q3 707 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 CYSLTR1Q9Y271 337 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 IGKV1D-33P01593 117 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 IGKV1-33P01594 117 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 IGFBP2P18065 325 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 EGR4Q05215 589 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 GAGE2BQ13066 116 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 C1orf100Q5SVJ3 147 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 FAM19A2Q8N3H0 131 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 OR9G4Q8NGQ1 327 aa8.82□□□□□ -1
PCDH9-204ENST00000544246 IGKCP01834 107 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 SSBP2P81877 361 aaPredicted RBP8.81□□□□□ -1
PCDH9-204ENST00000544246 RPL39P5Q59GN2 51 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 Q96M66 194 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 PPP1R3EQ9H7J1 279 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 OTORQ9NRC9 128 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 PRRC2BQ5JSZ5 2229 aaKnown RBP8.81□□□□□ -1
PCDH9-204ENST00000544246 KLF4O43474 513 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 ZNF415Q09FC8 603 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 ERG28Q9UKR5 140 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 COX5BP10606 129 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 FUT5Q11128 374 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 LDLRAD2Q5SZI1 272 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 COQ2Q96H96 371 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 KCNK17Q96T54 332 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 IGKV1D-42A0A075B6H8 117 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 GAGE13Q4V321 117 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 NRTNQ99748 197 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 MYO18AQ92614 2054 aaKnown RBP8.81□□□□□ -1
PCDH9-204ENST00000544246 TRGV11A0A075B6L2 103 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 A0A1W2PPV9 198 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 DUSP14O95147 198 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms