RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 CACNG8Q8WXS5 425 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 MOB3AQ96BX8 217 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 ZNF2Q9BSG1 426 aaPredicted RBP9.88□□□□□ -0.83
RTN3-213ENST00000543552 S4R3C0 116 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 SNAPC5O75971 98 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 RLN1P04808 185 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 GNRHRP30968 328 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 PRSS3P35030 304 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 TAS2R20P59543 309 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 OR1L6Q8NGR2 347 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 OR6F1Q8NGZ6 308 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 LSM10Q969L4 123 aaKnown RBP9.87□□□□□ -0.83
RTN3-213ENST00000543552 ATP6V0BQ99437 205 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 FKBP11Q9NYL4 201 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 MRPL27Q9P0M9 148 aaKnown RBP9.87□□□□□ -0.83
RTN3-213ENST00000543552 MLXQ9UH92 298 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 ANAPC10Q9UM13 185 aa9.87□□□□□ -0.83
RTN3-213ENST00000543552 A0A087WXM4 84 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-213ENST00000543552 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-213ENST00000543552 GPR31O00270 319 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 PGLYRP1O75594 196 aaPredicted RBP9.86□□□□□ -0.83
RTN3-213ENST00000543552 JTBO76095 146 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 SERPINE2P07093 398 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
RTN3-213ENST00000543552 OR13C7P0DN81 318 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 RFX2P48378 723 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 LPCAT3Q6P1A2 487 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 SPSB3Q6PJ21 355 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 SLC38A6Q8IZM9 456 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 DGCR14Q96DF8 476 aaKnown RBP9.86□□□□□ -0.83
RTN3-213ENST00000543552 BSCL2Q96G97 398 aaPredicted RBP9.86□□□□□ -0.83
RTN3-213ENST00000543552 TSC22D3Q99576 134 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 GGTLC1Q9BX51 225 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 WFDC10AQ9H1F0 79 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 RETNQ9HD89 108 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 PRNDQ9UKY0 176 aa9.86□□□□□ -0.83
RTN3-213ENST00000543552 SMIM31A0A1B0GVY4 71 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 TGOLN2O43493 480 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 SCAF4O95104 1147 aaKnown RBP9.85□□□□□ -0.83
RTN3-213ENST00000543552 TNFAIP8O95379 198 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 KRASP01116 189 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 PMP2P02689 132 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 C8orf88P0DMB2 117 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 NAT1P18440 290 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 EDN2P20800 178 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 RPS19P39019 145 aaKnown RBP9.85□□□□□ -0.83
RTN3-213ENST00000543552 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 SLC25A24Q6NUK1 477 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 UNQ9165/PRO28630Q6UXU0 137 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 OR10W1Q8NGF6 305 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 TMEM190Q8WZ59 177 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 TMEM56Q96MV1 263 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 SPAG8Q99932 426 aaPredicted RBP9.85□□□□□ -0.83
RTN3-213ENST00000543552 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 HINT2Q9BX68 163 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 ZNF436Q9C0F3 470 aaPredicted RBP9.85□□□□□ -0.83
RTN3-213ENST00000543552 C5orf66Q9H5L9 145 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 DAZ1Q9NQZ3 744 aaKnown RBP9.85□□□□□ -0.83
RTN3-213ENST00000543552 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
RTN3-213ENST00000543552 GAR1Q9NY12 217 aaKnown RBP9.85□□□□□ -0.83
RTN3-213ENST00000543552 OR51B2Q9Y5P1 312 aa9.85□□□□□ -0.83
RTN3-213ENST00000543552 F11RQ9Y624 299 aaKnown RBP9.85□□□□□ -0.83
RTN3-213ENST00000543552 LOC102724200A0A096LPH7 203 aaPredicted RBP9.84□□□□□ -0.83
RTN3-213ENST00000543552 TEX50A0A1B0GTY4 177 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 RPA2P15927 270 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 HRH1P35367 487 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 LPAR6P43657 344 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 TSPAN5P62079 268 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 ZNF585BQ52M93 769 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 LAMTOR1Q6IAA8 161 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 OR2C3Q8N628 320 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 FCAMRQ8WWV6 532 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 SLC25A46Q96AG3 418 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 YIPF6Q96EC8 236 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 CMTM3Q96MX0 182 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 SCPEP1Q9HB40 452 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 NDUFA4L2Q9NRX3 87 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
RTN3-213ENST00000543552 DNAH1Q9P2D7 4330 aa9.83□□□□□ -0.84
RTN3-213ENST00000543552 OR2T8A6NH00 312 aa9.83□□□□□ -0.84
RTN3-213ENST00000543552 NDUFA4O00483 81 aa9.83□□□□□ -0.84
RTN3-213ENST00000543552 APOA1P02647 267 aa9.83□□□□□ -0.84
RTN3-213ENST00000543552 G6PCP35575 357 aa9.83□□□□□ -0.84
RTN3-213ENST00000543552 APOC4P55056 127 aa9.83□□□□□ -0.84
RTN3-213ENST00000543552 LSM3P62310 102 aaKnown RBP9.83□□□□□ -0.84
RTN3-213ENST00000543552 FXYD6Q9H0Q3 95 aa9.83□□□□□ -0.84
RTN3-213ENST00000543552 IGHV3-35A0A0C4DH35 117 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 C15orf61A6NNL5 157 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 HLA-DMAP28067 261 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 RCVRNP35243 200 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 TGFBR1P36897 503 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 RELQ04864 619 aaPredicted RBP9.82□□□□□ -0.84
RTN3-213ENST00000543552 PHLDA2Q53GA4 152 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 UBAC2Q8NBM4 344 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms