RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TRIAP1O43715 76 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 TIMM8AO60220 97 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 OR2J3O76001 311 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 NDUFB2O95178 105 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 TIMP1P01033 207 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 IGHG1P01857 330 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 APCSP02743 223 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 MT-ATP8P03928 68 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 SLC25A5P05141 298 aaKnown RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 NTF3P20783 257 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 BLVRBP30043 206 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 FCGR2BP31994 310 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 GLRXP35754 106 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 MPV17P39210 176 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 NKX2-1P43699 371 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF133P52736 654 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF134P52741 427 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 TAS2R45P59539 299 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 TMEM187Q14656 261 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF77Q15935 545 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 TBC1D28Q2M2D7 210 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 CEACAM16Q2WEN9 425 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 Q56UQ5 140 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 FAM72AQ5TYM5 149 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 FAM72DQ6L9T8 149 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 SSX8Q7RTT4 187 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF550Q7Z398 422 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 FAM19A5Q7Z5A7 132 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 FAM72BQ86X60 149 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF695Q8IW36 515 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 KIR3DL3Q8N743 410 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 Q8NA96 180 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 SUMF1Q8NBK3 374 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 SMRP1Q8NCR6 262 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 OR10G7Q8NGN6 311 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 OR5C1Q8NGR4 320 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF721Q8TF20 911 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 H1FXQ92522 213 aaKnown RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 FLYWCH2Q96CP2 140 aaKnown RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ADAT3Q96EY9 351 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZBTB45Q96K62 511 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 C4orf45Q96LM5 186 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 C20orf173Q96LM9 149 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 RAB40CQ96S21 281 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ULBP3Q9BZM4 244 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 OR2H1Q9GZK4 316 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF665Q9H7R5 613 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF835Q9Y2P0 537 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 RCL1Q9Y2P8 373 aaKnown RBP3.59□□□□□ -1.83
SNHG1-219ENST00000542112 OR2W1Q9Y3N9 320 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 WNT6Q9Y6F9 365 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 ATG2AQ2TAZ0 1938 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 GREB1Q4ZG55 1949 aa3.59□□□□□ -1.83
SNHG1-219ENST00000542112 KIAA0100Q14667 2235 aaKnown RBP3.59□□□□□ -1.84
SNHG1-219ENST00000542112 VWA8A3KMH1 1905 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 PTPRSQ13332 1948 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 MYLKQ15746 1914 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 DENND4CQ5VZ89 1909 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 CCL15-CCL14A0A0B4J2E2 113 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 IGKV6-21A0A0C4DH24 114 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 IGHV1-24A0A0C4DH33 117 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 TRBV5-4A0A0C4DH59 114 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 A0A1B0GV50 99 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 FRG2CA6NGY1 282 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 SHISA7A6NL88 538 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 F5H697 171 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 CLDN5O00501 218 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 UQCRQO14949 82 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 NPFFO15130 113 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 CRLF1O75462 422 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 NAPSAO96009 420 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 IGLV3-25P01717 112 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 MRPL3P09001 348 aaKnown RBP3.58□□□□□ -1.84
SNHG1-219ENST00000542112 ZNF688P0C7X2 276 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 FCGR2AP12318 317 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 NPPBP16860 134 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 ACRV1P26436 265 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 CNTFRP26992 372 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 CTGFP29279 349 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 OPRK1P41145 380 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 RGRP47804 291 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 XGP55808 180 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 NANOS3P60323 173 aaKnown RBP3.58□□□□□ -1.84
SNHG1-219ENST00000542112 PSG4Q00888 419 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 ADIGQ0VDE8 80 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 IL11RAQ14626 422 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 STPG1Q5TH74 334 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 LINC01545Q5VT33 79 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 FAM219BQ5XKK7 198 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 PQLC2Q6ZP29 291 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 C2orf91Q6ZV80 131 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 ATP5L2Q7Z4Y8 100 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 MOB3BQ86TA1 216 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 HAPLN4Q86UW8 402 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 LYPD6Q86Y78 171 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 APRG1Q8IVJ8 170 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 ZDHHC23Q8IYP9 409 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 SLC22A24Q8N4F4 322 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 LINC01465Q8N7H1 131 aa3.58□□□□□ -1.84
SNHG1-219ENST00000542112 TEX45Q8NA69 505 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms