RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 COMMD1Q8N668 190 aa7.16□□□□□ -1.26
FNDC3A-206ENST00000541916 BUB1B-PAK6H3BSN5 160 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 GATCO43716 136 aaKnown RBP7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 DEFB112Q30KQ8 113 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 C1orf100Q5SVJ3 147 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 NEURL2Q9BR09 285 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 CREBBPQ92793 2442 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 C10orf105Q8TEF2 133 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 RCC2Q9P258 522 aaKnown RBP7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 SELENOKQ9Y6D0 94 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 TSC2P49815 1807 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 DOCK4Q8N1I0 1966 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 PCNX2A6NKB5 2137 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 NPIPB6E9PJ23 425 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 DUSP14O95147 198 aaKnown RBP7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 ZNF79Q15937 498 aa7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 ZNF660Q6AZW8 331 aaPredicted RBP7.15□□□□□ -1.26
FNDC3A-206ENST00000541916 IGSF23A1L1A6 192 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 MLNRO43193 412 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 CXCL3P19876 107 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 FDX2Q6P4F2 183 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 TEX45Q8NA69 505 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 ARL2-SNX15V9GYD0 113 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 IGKV3OR2-268A0A0C4DH90 116 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 SAA1P0DJI8 122 aaPredicted RBP7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 MORN2Q502X0 79 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 GPHA2Q96T91 129 aa7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 TSSC4Q9Y5U2 329 aaPredicted RBP7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 NUP214P35658 2090 aaPredicted RBP7.15□□□□□ -1.27
FNDC3A-206ENST00000541916 OVOL1O14753 267 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 EREGO14944 169 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 CDS2O95674 445 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 SULT1A1P50225 295 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 C19orf54Q5BKX5 351 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 TOLLIPQ9H0E2 274 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 PHLDA3Q9Y5J5 127 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 PTPRQQ9UMZ3 2332 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 TUSC1Q2TAM9 212 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 ZNF324BQ6AW86 544 aaPredicted RBP7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 P01737 135 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 CD5P06127 495 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 CX3CL1P78423 397 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 DTX2Q86UW9 622 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 CD177Q8N6Q3 437 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 TMEM116Q8NCL8 245 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 WFDC11Q8NEX6 87 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 USMG5Q96IX5 58 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 ZNF257Q9Y2Q1 563 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 TRAPPC1Q9Y5R8 145 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 TRBV5-7A0A0A0MS05 114 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 C19orf84I3L1E1 186 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 IGHV2-5P01817 119 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 EWSR1Q01844 656 aaKnown RBP eCLIP7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 VPREB3Q9UKI3 123 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 C9JCJ5 164 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 LEMD1Q68G75 181 aa7.14□□□□□ -1.27
FNDC3A-206ENST00000541916 ZNF318Q5VUA4 2279 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 MFAP2P55001 183 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 TCF24Q7RTU0 167 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 ANGPTL6Q8NI99 470 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 LYZL4Q96KX0 146 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 SPRY4Q9C004 299 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 MBPP02686 304 aaPredicted RBP7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 ZNF415Q09FC8 603 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 FAM74A4Q5TZK3 123 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 ELF5Q9UKW6 265 aaPredicted RBP7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 MFSD2BA6NFX1 497 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 PLA2G10O15496 165 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 PXMP4Q9Y6I8 212 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 APOC4P55056 127 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 UQCC3Q6UW78 93 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 ZNF818PQ6ZRF7 136 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 FA2HQ7L5A8 372 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 MRPL30Q8TCC3 161 aaKnown RBP7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 PEF1Q9UBV8 284 aaKnown RBP7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 NOTCH4Q99466 2003 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 FAM157CP0CG43 387 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 CD300CQ08708 224 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 PMS2P11Q13670 270 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 TMEM241Q24JQ0 296 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 PSMG4Q5JS54 123 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 FAM53AQ6NSI3 398 aaPredicted RBP7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 C1QTNF4Q9BXJ3 329 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 TMEM222Q9H0R3 208 aa7.13□□□□□ -1.27
FNDC3A-206ENST00000541916 HMSDA8MTL9 139 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 LEPP41159 167 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 AMTP48728 403 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 SYNJ2BPP57105 145 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 C15orf32Q32M92 178 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 LYRM2Q9NU23 88 aaPredicted RBP7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 TRGV4A0A0C4DH28 118 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 ZNF56Q15929 161 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 CLLU1Q5K131 121 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 ZNF600Q6ZNG1 722 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 FBLIM1Q8WUP2 373 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 CXorf1O96002 111 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 ZNF497Q6ZNH5 498 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 ADAMTS9Q9P2N4 1935 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 TMEM189A5PLL7 270 aa7.12□□□□□ -1.27
FNDC3A-206ENST00000541916 FOXI3A8MTJ6 420 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms