RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 FAM157CP0CG43 387 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 VDAC2P45880 294 aaPredicted RBP22.2■■□□□ 1.14
CCM2-218ENST00000541586 PSG5Q15238 335 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 ALKAL2Q6UX46 152 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 C9orf139Q6ZV77 190 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 TEX45Q8NA69 505 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 OR4C12Q96R67 309 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 UBQLN2Q9UHD9 624 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 TEX50A0A1B0GTY4 177 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 IGKV1D-33P01593 117 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 IGKV1-33P01594 117 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 FGF2P09038 288 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 FBP1P09467 338 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 CD24P25063 80 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 TMEM14EPQ6UXP3 125 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 OR5C1Q8NGR4 320 aa22.2■■□□□ 1.14
CCM2-218ENST00000541586 ZNF48Q96MX3 618 aaPredicted RBP22.2■■□□□ 1.14
CCM2-218ENST00000541586 ZNF430Q9H8G1 570 aaPredicted RBP22.2■■□□□ 1.14
CCM2-218ENST00000541586 OPN1MWP04001 364 aa22.19■■□□□ 1.14
CCM2-218ENST00000541586 CRYGBP07316 175 aa22.19■■□□□ 1.14
CCM2-218ENST00000541586 OPN1MW2P0DN77 364 aa22.19■■□□□ 1.14
CCM2-218ENST00000541586 OPN1MW3P0DN78 364 aa22.19■■□□□ 1.14
CCM2-218ENST00000541586 TPT1P13693 172 aaKnown RBP22.19■■□□□ 1.14
CCM2-218ENST00000541586 HOXA1P49639 335 aaPredicted RBP22.19■■□□□ 1.14
CCM2-218ENST00000541586 DYNLT3P51808 116 aa22.19■■□□□ 1.14
CCM2-218ENST00000541586 OR5B3Q8NH48 314 aa22.19■■□□□ 1.14
CCM2-218ENST00000541586 STRAPQ9Y3F4 350 aaKnown RBP22.19■■□□□ 1.14
CCM2-218ENST00000541586 TNCP24821 2201 aa22.19■■□□□ 1.14
CCM2-218ENST00000541586 LY86O95711 162 aa22.18■■□□□ 1.14
CCM2-218ENST00000541586 MOSP00540 346 aa22.18■■□□□ 1.14
CCM2-218ENST00000541586 CLINT1Q14677 625 aa22.18■■□□□ 1.14
CCM2-218ENST00000541586 MRGPRG-AS1Q2M3A8 158 aa22.18■■□□□ 1.14
CCM2-218ENST00000541586 BAP18Q8IXM2 172 aa22.18■■□□□ 1.14
CCM2-218ENST00000541586 SIGLECL1Q8N7X8 197 aa22.18■■□□□ 1.14
CCM2-218ENST00000541586 CLCC1Q96S66 551 aa22.18■■□□□ 1.14
CCM2-218ENST00000541586 HIPK2Q9H2X6 1198 aa22.18■■□□□ 1.14
CCM2-218ENST00000541586 HEYLQ9NQ87 328 aaPredicted RBP22.18■■□□□ 1.14
CCM2-218ENST00000541586 JTBO76095 146 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 SNRNP70P08621 437 aaKnown RBP22.17■■□□□ 1.14
CCM2-218ENST00000541586 PRCDQ00LT1 54 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 PJVKQ0ZLH3 352 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 HAPLN4Q86UW8 402 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 HINT2Q9BX68 163 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 COMMD5Q9GZQ3 224 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 NIPBLQ6KC79 2804 aaeCLIP22.17■■□□□ 1.141e-6■■■■■ 35.4
CCM2-218ENST00000541586 ARL16Q0P5N6 197 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 HNF4GQ14541 408 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 EAF1Q96JC9 268 aaPredicted RBP22.17■■□□□ 1.14
CCM2-218ENST00000541586 METTL1Q9UBP6 276 aaKnown RBP22.17■■□□□ 1.14
CCM2-218ENST00000541586 SIGLEC9Q9Y336 463 aa22.17■■□□□ 1.14
CCM2-218ENST00000541586 HES1Q14469 280 aa22.16■■□□□ 1.14
CCM2-218ENST00000541586 FBLN7Q53RD9 439 aa22.16■■□□□ 1.14
CCM2-218ENST00000541586 RBMS3Q6XE24 437 aaKnown RBP22.16■■□□□ 1.14
CCM2-218ENST00000541586 THNSL2Q86YJ6 484 aa22.16■■□□□ 1.14
CCM2-218ENST00000541586 LURAP1LQ8IV03 231 aa22.16■■□□□ 1.14
CCM2-218ENST00000541586 UBAC2Q8NBM4 344 aa22.16■■□□□ 1.14
CCM2-218ENST00000541586 OR1S2Q8NGQ3 325 aa22.16■■□□□ 1.14
CCM2-218ENST00000541586 SCARB1Q8WTV0 552 aa22.16■■□□□ 1.14
CCM2-218ENST00000541586 F2RL1P55085 397 aa22.15■■□□□ 1.14
CCM2-218ENST00000541586 EIF5AP63241 154 aaKnown RBP22.15■■□□□ 1.14
CCM2-218ENST00000541586 PRSS8Q16651 343 aa22.15■■□□□ 1.14
CCM2-218ENST00000541586 OR2T10Q8NGZ9 312 aa22.15■■□□□ 1.14
CCM2-218ENST00000541586 PHYHIPLQ96FC7 376 aa22.15■■□□□ 1.14
CCM2-218ENST00000541586 MEGF9Q9H1U4 602 aa22.15■■□□□ 1.14
CCM2-218ENST00000541586 ENY2Q9NPA8 101 aa22.15■■□□□ 1.14
CCM2-218ENST00000541586 TNFRSF19Q9NS68 423 aa22.15■■□□□ 1.14
CCM2-218ENST00000541586 BORCS7-ASMTA0A0B4J1R7 106 aa22.14■■□□□ 1.14
CCM2-218ENST00000541586 C15orf62A8K5M9 175 aa22.14■■□□□ 1.14
CCM2-218ENST00000541586 MMDQ15546 238 aa22.14■■□□□ 1.14
CCM2-218ENST00000541586 STPG2Q8N412 459 aa22.14■■□□□ 1.14
CCM2-218ENST00000541586 OR1L8Q8NGR8 309 aa22.14■■□□□ 1.14
CCM2-218ENST00000541586 FBXL15Q9H469 300 aa22.14■■□□□ 1.14
CCM2-218ENST00000541586 PLEKHA3Q9HB20 300 aa22.14■■□□□ 1.14
CCM2-218ENST00000541586 NDUFA4L2Q9NRX3 87 aa22.14■■□□□ 1.14
CCM2-218ENST00000541586 HBG1P69891 147 aa22.14■■□□□ 1.13
CCM2-218ENST00000541586 HBG2P69892 147 aa22.14■■□□□ 1.13
CCM2-218ENST00000541586 OR8G2PQ6IF36 304 aa22.14■■□□□ 1.13
CCM2-218ENST00000541586 MMD2Q8IY49 270 aa22.14■■□□□ 1.13
CCM2-218ENST00000541586 SSX3Q99909 188 aa22.14■■□□□ 1.13
CCM2-218ENST00000541586 E7EUB6 86 aa22.13■■□□□ 1.13
CCM2-218ENST00000541586 RRHO14718 337 aa22.13■■□□□ 1.13
CCM2-218ENST00000541586 IFNA10P01566 189 aa22.13■■□□□ 1.13
CCM2-218ENST00000541586 HTR2BP41595 481 aa22.13■■□□□ 1.13
CCM2-218ENST00000541586 RPP30P78346 268 aaKnown RBP22.13■■□□□ 1.13
CCM2-218ENST00000541586 EBI3Q14213 229 aa22.13■■□□□ 1.13
CCM2-218ENST00000541586 C10orf55Q5SWW7 151 aa22.13■■□□□ 1.13
CCM2-218ENST00000541586 PPP1R27Q86WC6 154 aa22.13■■□□□ 1.13
CCM2-218ENST00000541586 DUX5Q96PT3 197 aa22.13■■□□□ 1.13
CCM2-218ENST00000541586 PMS2P5A8MQ11 134 aa22.12■■□□□ 1.13
CCM2-218ENST00000541586 NBR2O15453 112 aa22.12■■□□□ 1.13
CCM2-218ENST00000541586 ZNF266Q14584 549 aa22.12■■□□□ 1.13
CCM2-218ENST00000541586 Q6YL49 198 aa22.12■■□□□ 1.13
CCM2-218ENST00000541586 NPBQ8NG41 125 aa22.12■■□□□ 1.13
CCM2-218ENST00000541586 ZNF418Q8TF45 676 aaPredicted RBP22.12■■□□□ 1.13
CCM2-218ENST00000541586 ATP5SQ99766 215 aa22.12■■□□□ 1.13
CCM2-218ENST00000541586 ARV1Q9H2C2 271 aa22.12■■□□□ 1.13
CCM2-218ENST00000541586 Q8N6K4 173 aa22.11■■□□□ 1.13
CCM2-218ENST00000541586 OR10W1Q8NGF6 305 aa22.11■■□□□ 1.13
CCM2-218ENST00000541586 CGB1A6NKQ9 187 aa22.11■■□□□ 1.13
CCM2-218ENST00000541586 HOXA3O43365 443 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms