RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
HMGA2-210ENST00000541363 WNT2BQ93097 391 aa13.11□□□□□ -0.31
HMGA2-210ENST00000541363 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 TMEM167AQ8TBQ9 72 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 ZNF826PQ6ZT77 177 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 DNAJC30Q96LL9 226 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 GDF15Q99988 308 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 SEPSECSQ9HD40 501 aaKnown RBP13.1□□□□□ -0.31
HMGA2-210ENST00000541363 IGHV1-69-2A0A0G2JMI3 117 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 MUC21A0A0G2JKD1 596 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 MUC21A0A140T8X8 626 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 CCL4P13236 92 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 MUC21Q5SSG8 566 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 APCDD1LQ8NCL9 501 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 DOCK8Q8NF50 2099 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 FHL5Q5TD97 284 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 LOXL4Q96JB6 756 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
HMGA2-210ENST00000541363 TAF1P21675 1872 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 IGHV3OR16-13A0A075B7E8 117 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 IGHV3-74A0A0B4J1X5 117 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 ZNF415Q09FC8 603 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 VN1R4Q7Z5H5 301 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 JMJD8Q96S16 334 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 AQP3Q92482 292 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 CITED1Q99966 193 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 GPR132Q9UNW8 380 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 DTX1Q86Y01 620 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 COX14Q96I36 57 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 HEATR5AQ86XA9 2040 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 RICTORQ6R327 1708 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 NTN1O95631 604 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 IGKCP01834 107 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 FAM19A2Q8N3H0 131 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 FBXL7Q9UJT9 491 aa13.09□□□□□ -0.31
HMGA2-210ENST00000541363 MYOD1P15172 320 aa13.08□□□□□ -0.31
HMGA2-210ENST00000541363 ORMDL2Q53FV1 153 aa13.08□□□□□ -0.31
HMGA2-210ENST00000541363 LAMTOR2Q9Y2Q5 125 aa13.08□□□□□ -0.31
HMGA2-210ENST00000541363 A0A1W2PRX2 142 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 HIGD1CA8MV81 97 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 INS-IGF2F8WCM5 200 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 CGAP01215 116 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 INSP01308 110 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 TMEM91Q6ZNR0 172 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 ERVK11-1P61568 191 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 NR2C2APQ86WQ0 139 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 ASCL2Q99929 193 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 RREB1Q92766 1687 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
HMGA2-210ENST00000541363 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 PSCAO43653 123 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 GFRA3O60609 400 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 IL11P20809 199 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 C9orf40Q8IXQ3 194 aa13.08□□□□□ -0.32
HMGA2-210ENST00000541363 KLHDC2Q9Y2U9 406 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 SCO2A0A1W2PP80 73 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 OCIAD2Q56VL3 154 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 PPP1R27Q86WC6 154 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 RBM38Q9H0Z9 239 aaKnown RBP13.07□□□□□ -0.32
HMGA2-210ENST00000541363 Q9H3A6 140 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 IGKV1D-42A0A075B6H8 117 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 ZNHIT1O43257 154 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 FUT5Q11128 374 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 ARPC1AQ92747 370 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 LAMB2P55268 1798 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 DIDO1Q9BTC0 2240 aaKnown RBP13.07□□□□□ -0.32
HMGA2-210ENST00000541363 HRKO00198 91 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 GZMBP10144 247 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 CLEC19AQ6UXS0 136 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 TMEM54Q969K7 222 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 GGTLC1Q9BX51 225 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 CACNA1DQ01668 2161 aa13.07□□□□□ -0.32
HMGA2-210ENST00000541363 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.06□□□□□ -0.32
HMGA2-210ENST00000541363 GFI1BQ5VTD9 330 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 EPDR1Q9UM22 224 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 KLF12Q9Y4X4 402 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 MYLKQ15746 1914 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 ZNF721Q8TF20 911 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 KCNK17Q96T54 332 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 PRDM13Q9H4Q3 707 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 PAX4O43316 350 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 CXCL10P02778 98 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 OR52E5Q8NH55 327 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 SPANXA1Q9NS26 97 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 WDR81Q562E7 1941 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 KLF4O43474 513 aa13.06□□□□□ -0.32
HMGA2-210ENST00000541363 VDAC2P45880 294 aaPredicted RBP13.06□□□□□ -0.32
HMGA2-210ENST00000541363 NANOS3P60323 173 aaKnown RBP13.06□□□□□ -0.32
HMGA2-210ENST00000541363 MPTX1A8MV57 137 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 B9A039 149 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 FGF11Q92914 225 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 EGR4Q05215 589 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 CHCHD5Q9BSY4 110 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms