RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 STAG3L2P0CL84 134 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 STAG3L3P0CL85 134 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 GCH1P30793 250 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 TIMP3P35625 211 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 ERVK-16P61578 105 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 ARL16Q0P5N6 197 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 ACSM6Q6P461 480 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 TEX38Q6PEX7 206 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 HAPLN4Q86UW8 402 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 DRAM1Q8N682 238 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 OR10D3Q8NH80 312 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 PPP1R35Q8TAP8 253 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 BORCS7Q96B45 105 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 TRIB1Q96RU8 372 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 SRXN1Q9BYN0 137 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 OR2J1Q9GZK6 312 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 PATZ1Q9HBE1 687 aaKnown RBP8.65□□□□□ -1.02
CHFR-219ENST00000541341 CLCF1Q9UBD9 225 aa8.65□□□□□ -1.02
CHFR-219ENST00000541341 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
CHFR-219ENST00000541341 IGHV3-15A0A0B4J1V0 119 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 A0A0G2JRQ6 117 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 C5orf49A4QMS7 147 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 IFNL4K9M1U5 179 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 EREGO14944 169 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 CXCL13O43927 109 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 ZNF253O75346 499 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 RBMXL2O75526 392 aaKnown RBP8.64□□□□□ -1.03
CHFR-219ENST00000541341 ZNF205O95201 554 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 IGKV1-39P01597 117 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 IGKV1D-39P04432 117 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 SNRPCP09234 159 aaKnown RBP8.64□□□□□ -1.03
CHFR-219ENST00000541341 OR4A8P0C604 315 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 CHRNA7P36544 502 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 KLF3P57682 345 aaPredicted RBP8.64□□□□□ -1.03
CHFR-219ENST00000541341 TAS2R45P59539 299 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 ARF1P84077 181 aaKnown RBP8.64□□□□□ -1.03
CHFR-219ENST00000541341 DMRTC1Q5HYR2 192 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 Q6ZPA2 131 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 Q6ZRM9 215 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 APH1AQ96BI3 265 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 SLC35E1Q96K37 410 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
CHFR-219ENST00000541341 MSL2Q9HCI7 577 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 NPVFQ9HCQ7 196 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 OSTCQ9NRP0 149 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 CBLN4Q9NTU7 201 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 BET1LQ9NYM9 111 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 MRPL27Q9P0M9 148 aaKnown RBP8.64□□□□□ -1.03
CHFR-219ENST00000541341 RFNGQ9Y644 331 aa8.64□□□□□ -1.03
CHFR-219ENST00000541341 DSCAMO60469 2012 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 MBD3L4A6NDZ8 208 aaPredicted RBP8.63□□□□□ -1.03
CHFR-219ENST00000541341 MBD3L3A6NE82 208 aaPredicted RBP8.63□□□□□ -1.03
CHFR-219ENST00000541341 MBD3L5A6NJ08 208 aaPredicted RBP8.63□□□□□ -1.03
CHFR-219ENST00000541341 PMS2P5A8MQ11 134 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 FCN1O00602 326 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 SPINT2O43291 252 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 NDUFB4O95168 129 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 ANOS1P23352 680 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 TBC1D28Q2M2D7 210 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 HLA-DRB5Q30154 266 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 TMEM30BQ3MIR4 351 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 TIGITQ495A1 244 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 Q6P435 159 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 MBD3L2Q8NHZ7 208 aaPredicted RBP8.63□□□□□ -1.03
CHFR-219ENST00000541341 RDH5Q92781 318 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 RNASE6Q93091 150 aaKnown RBP8.63□□□□□ -1.03
CHFR-219ENST00000541341 POM121L2Q96KW2 1035 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 COMMD5Q9GZQ3 224 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 SLC35D1Q9NTN3 355 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 IL19Q9UHD0 177 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 TBL2Q9Y4P3 447 aaKnown RBP8.63□□□□□ -1.03
CHFR-219ENST00000541341 FREM1Q5H8C1 2179 aa8.63□□□□□ -1.03
CHFR-219ENST00000541341 ODAMA1E959 279 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 ITGB1BP1O14713 200 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 SMAD7O15105 426 aaKnown RBP8.62□□□□□ -1.03
CHFR-219ENST00000541341 YPEL1O60688 119 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 LILRA1O75019 489 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 NXPH3O95157 252 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 NGFP01138 241 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 CD55P08174 381 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 IL6RP08887 468 aaPredicted RBP8.62□□□□□ -1.03
CHFR-219ENST00000541341 G0S2P27469 103 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 ERVK11-1P61568 191 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 GNB1P62873 340 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 SRYQ05066 204 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 FOXF2Q12947 444 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 DAZAP2Q15038 168 aaPredicted RBP8.62□□□□□ -1.03
CHFR-219ENST00000541341 GUSBP1Q15486 140 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 DEFB113Q30KQ7 82 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 SAPCD1Q5SSQ6 148 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 TPTE2P1Q5T6R2 138 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 CPEB3Q8NE35 698 aaKnown RBP8.62□□□□□ -1.03
CHFR-219ENST00000541341 ZNF738Q8NE65 137 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 SLC24A4Q8NFF2 622 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 OR4A16Q8NH70 328 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 FAM222BQ8WU58 562 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
CHFR-219ENST00000541341 YPEL2Q96QA6 119 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 HSPB9Q9BQS6 159 aa8.62□□□□□ -1.03
CHFR-219ENST00000541341 PRRG4Q9BZD6 226 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms