RNA–Protein interactions for RNA: ENST00000541152.6

SEPT9-208, Transcript of septin 9, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEPT9, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-208	ENST00000541152	RNF2	Q99496	336 aa		12.48	□□□□□ -0.41
SEPT9-208	ENST00000541152	NDUFB8	O95169	186 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	C3orf79	P0CE67	100 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	IGFBP2	P18065	325 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	PTTG1IP	P53801	180 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	UNQ5815/PRO19632	Q6UWF5	114 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	TMEM105	Q8N8V8	129 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	OR4B1	Q8NGF8	309 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	BCL2L2	Q92843	193 aa	Predicted RBP	12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	HEATR1	Q9H583	2144 aa	Known RBP	12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	AGFG2	O95081	481 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	DUT	P33316	252 aa	Known RBP	12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	TP73-AS1	Q9UF72	201 aa		12.47	□□□□□ -0.41
SEPT9-208	ENST00000541152	C20orf202	A1L168	122 aa		12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	ZNF766	Q5HY98	468 aa		12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	RNASE8	Q8TDE3	154 aa	Known RBP	12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	NPVF	Q9HCQ7	196 aa		12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	LAMTOR2	Q9Y2Q5	125 aa		12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	OR7C2	O60412	319 aa		12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	ESD	P10768	282 aa		12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152		Q0VG73	95 aa		12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	C1orf210	Q8IVY1	113 aa		12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	SPEN	Q96T58	3664 aa	Known RBP	12.46	□□□□□ -0.41
SEPT9-208	ENST00000541152	DPRX	A6NFQ7	191 aa		12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	CCL25	O15444	150 aa		12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	RHOB	P62745	196 aa		12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	ARG2	P78540	354 aa		12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	DCAF12	Q5T6F0	453 aa		12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	FBXW9	Q5XUX1	488 aa		12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	SLC35E4	Q6ICL7	350 aa		12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	KLF14	Q8TD94	323 aa	Predicted RBP	12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	LINC00479	Q96M42	142 aa		12.46	□□□□□ -0.42
SEPT9-208	ENST00000541152	MPDU1	O75352	247 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	IGLC2	P0DOY2	106 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	IGLC3	P0DOY3	106 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	TEPP	Q6URK8	271 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	C11orf53	Q8IXP5	236 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	TMEM140	Q9NV12	185 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	TCF19	Q9Y242	345 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	PCSK5	Q92824	1860 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	VDAC2	P45880	294 aa	Predicted RBP	12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	ZNF134	P52741	427 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	ERVK-16	P61578	105 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	MLANA	Q16655	118 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	FAM168A	Q92567	244 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	SFXN3	Q9BWM7	321 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	UQCR10	Q9UDW1	63 aa		12.45	□□□□□ -0.42
SEPT9-208	ENST00000541152	BMPR1B	O00238	502 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	NTN3	O00634	580 aa	Predicted RBP	12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	SPINT2	O43291	252 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	CTRL	P40313	264 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	TMEM136	Q6ZRR5	245 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	NANOS1	Q8WY41	292 aa	Known RBP	12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	SLC45A2	Q9UMX9	530 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	BDP1	A6H8Y1	2624 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	CRYAB	P02511	175 aa	Known RBP	12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	ACP7	Q6ZNF0	438 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	C1orf229	Q6ZS94	237 aa	Predicted RBP	12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	KCNS1	Q96KK3	526 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	GNB1L	Q9BYB4	327 aa		12.44	□□□□□ -0.42
SEPT9-208	ENST00000541152	ABCA1	O95477	2261 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	PRSS46	E5RG02	174 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	ZNF324	O75467	553 aa	Predicted RBP	12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	RELB	Q01201	579 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	MRPL49	Q13405	166 aa	Known RBP	12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	TRGV10	A0A0A0MS01	117 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	CA2	P00918	260 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	CX3CL1	P78423	397 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	TMEM249	Q2WGJ8	235 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	TIGIT	Q495A1	244 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152		Q56UQ5	140 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	CLEC2A	Q6UVW9	174 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	NIT1	Q86X76	327 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	BORCS7	Q96B45	105 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	TXNDC17	Q9BRA2	123 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	PLEKHA3	Q9HB20	300 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	ROS1	P08922	2347 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	IGHV3OR15-7	A0A075B7D8	119 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	GPR6	P46095	362 aa	Predicted RBP	12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	WDR82	Q6UXN9	313 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	TSKU	Q8WUA8	353 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	ST6GALNAC6	Q969X2	333 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	S1PR3	Q99500	378 aa		12.43	□□□□□ -0.42
SEPT9-208	ENST00000541152	MT-CO2	P00403	227 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	NPY1R	P25929	384 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	SLA	Q13239	276 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	CD177	Q8N6Q3	437 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	ZNRF1	Q8ND25	227 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	CLEC7A	Q9BXN2	247 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	CDC42EP3	Q9UKI2	254 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	LSM4	Q9Y4Z0	139 aa	Known RBP	12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	PCNX2	A6NKB5	2137 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	TIMM8A	O60220	97 aa	Predicted RBP	12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	IBA57	Q5T440	356 aa	Known RBP	12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	SGK494	Q96LW2	274 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	SSBP4	Q9BWG4	385 aa	Predicted RBP	12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	DUSP13	Q9UII6	198 aa		12.42	□□□□□ -0.42
SEPT9-208	ENST00000541152	PRR27	Q6MZM9	219 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms