RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 DEFB112Q30KQ8 113 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 C11orf87Q6NUJ2 197 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 PRSS54Q6PEW0 395 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 RBMS3Q6XE24 437 aaKnown RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 IL17RELQ6ZVW7 336 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 ZNF546Q86UE3 836 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 NOXA1Q86UR1 476 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 THNSL2Q86YJ6 484 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 MMD2Q8IY49 270 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 INO80EQ8NBZ0 244 aaPredicted RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 OR8H1Q8NGG4 311 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 OR4A5Q8NH83 315 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 TMEM167AQ8TBQ9 72 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 DCUN1D4Q92564 292 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 HYLS1Q96M11 299 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 RASL11BQ9BPW5 248 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 QTRT1Q9BXR0 403 aaKnown RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 FBXL15Q9H469 300 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 ZNF430Q9H8G1 570 aaPredicted RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 HEYLQ9NQ87 328 aaPredicted RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 BET1LQ9NYM9 111 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 PFDN2Q9UHV9 154 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 PITPNC1Q9UKF7 332 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 RCL1Q9Y2P8 373 aaKnown RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 SIGLEC9Q9Y336 463 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 POMT1Q9Y6A1 747 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 SONP18583 2426 aaKnown RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 HIVEP2P31629 2446 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 WNK2Q9Y3S1 2297 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 TRAV14DV4A0A0A6YYC5 116 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 TEX50A0A1B0GTY4 177 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 MDFIC2A0A1B0GVS7 189 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 C15orf61A6NNL5 157 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 INAFM1C9JVW0 142 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 E5RGE8 158 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 H3BUX3 64 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 K7EPK0 472 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 RRHO14718 337 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 GPR137BO60478 399 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 PITX3O75364 302 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 DEDDO75618 318 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 FGF2P09038 288 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 P0C879 139 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 IAPPP10997 89 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 SLC25A4P12235 298 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 HOXA1P49639 335 aaPredicted RBP5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 CAV2P51636 162 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 DYNLT3P51808 116 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 NKX2-5P52952 324 aaPredicted RBP5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 AP2S1P53680 142 aaPredicted RBP5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 SPCS3P61009 180 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 HSPE1P61604 102 aaKnown RBP5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 RPL23AP62750 156 aaKnown RBP5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 TNFRSF9Q07011 255 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 PJVKQ0ZLH3 352 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 IL15RAQ13261 267 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 SCGB2A2Q13296 93 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 EBI3Q14213 229 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 TNXAQ16473 311 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 PRSS8Q16651 343 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 SPINK9Q5DT21 86 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 ZNF429Q86V71 674 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 PPP1R27Q86WC6 154 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 PUSL1Q8N0Z8 303 aaKnown RBP5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 FAM71E2Q8N5Q1 922 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 NPBQ8NG41 125 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 OR1L8Q8NGR8 309 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 OR52E5Q8NH55 327 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 GRPEL2Q8TAA5 225 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 DTD1Q8TEA8 209 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 ABHD5Q8WTS1 349 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 RAB40CQ96S21 281 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 HIPK2Q9H2X6 1198 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 RBKSQ9H477 322 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 TNFRSF19Q9NS68 423 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 TMEM160Q9NX00 188 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 PSENENQ9NZ42 101 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 OR5AC2Q9NZP5 309 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 MBD2Q9UBB5 411 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 HSPB7Q9UBY9 170 aa5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 PAIP2BQ9ULR5 123 aaKnown RBP5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 FOXA2Q9Y261 457 aaPredicted RBP5.3□□□□□ -1.56
CLTCL1-206ENST00000540896 HMSDA8MTL9 139 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 H0YIZ8 118 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 FCN1O00602 326 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 FSHBP01225 129 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 IFNA10P01566 189 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 IGHV4-59P01825 116 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 IL6RP08887 468 aaPredicted RBP5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 MYOD1P15172 320 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 MAS1LP35410 378 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 RPL27AP46776 148 aaKnown RBP5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 P2RY1P47900 373 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 RPP30P78346 268 aaKnown RBP5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 AANATQ16613 207 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 C5orf64Q2M2E5 130 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 C9orf152Q5JTZ5 239 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 TMEM65Q6PI78 240 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 TMEM219Q86XT9 240 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms