RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 HOXB5P09067 269 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 AREGP15514 252 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 SRPXP78539 464 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 SPINK9Q5DT21 86 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 GGNBP1Q5YKI7 109 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 C11orf87Q6NUJ2 197 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 UNQ5815/PRO19632Q6UWF5 114 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 OR10W1Q8NGF6 305 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 CHPT1Q8WUD6 406 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 RRNAD1Q96FB5 475 aaKnown RBP13.03□□□□□ -0.32
UBC-208ENST00000540700 FYTTD1Q96QD9 318 aaKnown RBP13.03□□□□□ -0.32
UBC-208ENST00000540700 NDUFA4L2Q9NRX3 87 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 TENM3Q9P273 2699 aa13.03□□□□□ -0.32
UBC-208ENST00000540700 TET2Q6N021 2002 aaPredicted RBP13.02□□□□□ -0.33
UBC-208ENST00000540700 A0A1W2PN81 502 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 IGLC7A0M8Q6 106 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 RBMXL2O75526 392 aaKnown RBP13.02□□□□□ -0.33
UBC-208ENST00000540700 SNAPC5O75971 98 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 ACTL6BO94805 426 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 VDAC1P21796 283 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 CHRNA7P36544 502 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 OXA1LQ15070 435 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 AARDQ4LEZ3 155 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 AKIRIN2Q53H80 203 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 CENPVQ7Z7K6 275 aaPredicted RBP13.02□□□□□ -0.33
UBC-208ENST00000540700 FAM219AQ8IW50 185 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 OR5AU1Q8NGC0 362 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 OR4A16Q8NH70 328 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 RNASE11Q8TAA1 199 aaKnown RBP13.02□□□□□ -0.33
UBC-208ENST00000540700 KLK15Q9H2R5 256 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 PRNDQ9UKY0 176 aa13.02□□□□□ -0.33
UBC-208ENST00000540700 DUXBA0A1W2PPF3 345 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 ATG12O94817 140 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 NXPH3O95157 252 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 IGLV1-40P01703 118 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 IGHG4P01861 327 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 REG1AP05451 166 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 WT1-ASQ06250 92 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 RGS21Q2M5E4 152 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 ZNF429Q86V71 674 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 OR5T1Q8NG75 326 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 COQ8AQ8NI60 647 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 MRAPQ8TCY5 172 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 PHB2Q99623 299 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 COMMD5Q9GZQ3 224 aa13.01□□□□□ -0.33
UBC-208ENST00000540700 CCSO14618 274 aa13□□□□□ -0.33
UBC-208ENST00000540700 PITX3O75364 302 aa13□□□□□ -0.33
UBC-208ENST00000540700 PRH1P02810 166 aa13□□□□□ -0.33
UBC-208ENST00000540700 PSMB8P28062 276 aa13□□□□□ -0.33
UBC-208ENST00000540700 DEFA5Q01523 94 aa13□□□□□ -0.33
UBC-208ENST00000540700 KIAA0141Q14154 515 aaPredicted RBP13□□□□□ -0.33
UBC-208ENST00000540700 C18orf65Q6ZTR6 163 aa13□□□□□ -0.33
UBC-208ENST00000540700 OR1L8Q8NGR8 309 aa13□□□□□ -0.33
UBC-208ENST00000540700 SPIN2AQ99865 258 aa13□□□□□ -0.33
UBC-208ENST00000540700 SPIN2BQ9BPZ2 258 aa13□□□□□ -0.33
UBC-208ENST00000540700 DMRT1Q9Y5R6 373 aa13□□□□□ -0.33
UBC-208ENST00000540700 ADARB2-AS1A8MUL3 147 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 RPLP1P05386 114 aaKnown RBP12.99□□□□□ -0.33
UBC-208ENST00000540700 TRAPPC2P0DI81 140 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 TRAPPC2BP0DI82 140 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 SULT1A3P0DMM9 295 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 SULT1A4P0DMN0 295 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 HSPE1P61604 102 aaKnown RBP12.99□□□□□ -0.33
UBC-208ENST00000540700 PRCDQ00LT1 54 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 SMCO1Q147U7 214 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 KPRPQ5T749 579 aaPredicted RBP12.99□□□□□ -0.33
UBC-208ENST00000540700 SAMD5Q5TGI4 173 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 C12orf45Q8N5I9 185 aaPredicted RBP12.99□□□□□ -0.33
UBC-208ENST00000540700 TTC9CQ8N5M4 171 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 RNF152Q8N8N0 203 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 OR5B3Q8NH48 314 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 OR10C1Q96KK4 312 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 CITED2Q99967 270 aaPredicted RBP12.99□□□□□ -0.33
UBC-208ENST00000540700 HINT2Q9BX68 163 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 ZNF257Q9Y2Q1 563 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 TMED3Q9Y3Q3 217 aa12.99□□□□□ -0.33
UBC-208ENST00000540700 C7orf66A4D0T2 115 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 PRAF2O60831 178 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 FBXO24O75426 580 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 CRYGCP07315 174 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 CTRB1P17538 263 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 CD83Q01151 205 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 TMEM267Q0VDI3 215 aaPredicted RBP12.98□□□□□ -0.33
UBC-208ENST00000540700 TATDN3Q17R31 274 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 CTRB2Q6GPI1 263 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 REC114Q7Z4M0 266 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 MYOZ3Q8TDC0 251 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.98□□□□□ -0.33
UBC-208ENST00000540700 COA4Q9NYJ1 87 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 FKBP11Q9NYL4 201 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 ALG5Q9Y673 324 aa12.98□□□□□ -0.33
UBC-208ENST00000540700 A0A1B0GU03 582 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 PSMB6P28072 239 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 MFAP2P55001 183 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 SLC35B1P78383 322 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 FOXE3Q13461 319 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 CXorf66Q5JRM2 361 aaPredicted RBP12.97□□□□□ -0.33
UBC-208ENST00000540700 TEX38Q6PEX7 206 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms