RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 KLF3P57682 345 aaPredicted RBP11.62□□□□□ -0.55
INO80E-203ENST00000540562 LOXL3P58215 753 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 ATP6V1FQ16864 119 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 C19orf35Q6ZS72 473 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 H1FXQ92522 213 aaKnown RBP11.62□□□□□ -0.55
INO80E-203ENST00000540562 RPH3ALQ9UNE2 315 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 NPY1RP25929 384 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 CRYBB3P26998 211 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 DIAPH2-AS1Q14236 149 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 WFDC8Q8IUA0 241 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 ZBTB34Q8NCN2 500 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 LINC00479Q96M42 142 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 RNASE7Q9H1E1 156 aaKnown RBP11.61□□□□□ -0.55
INO80E-203ENST00000540562 PARD6AQ9NPB6 346 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 TIMM9Q9Y5J7 89 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 H3BTX0 84 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 ADMP35318 185 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 IER3P46695 156 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 KCNIP4Q6PIL6 250 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 SLC24A4Q8NFF2 622 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 SFRP2Q96HF1 295 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 LURAP1Q96LR2 239 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 UHRF2Q96PU4 802 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 TMEM242Q9NWH2 141 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 TRAV5A0A0B4J249 113 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 SRRM4A7MD48 611 aaKnown RBP11.61□□□□□ -0.55
INO80E-203ENST00000540562 SRRM5B3KS81 715 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
INO80E-203ENST00000540562 SPCS3P61009 180 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 EFNB3Q15768 340 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 BATFQ16520 125 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 OR9G1Q8NH87 305 aa11.61□□□□□ -0.55
INO80E-203ENST00000540562 MGST3O14880 152 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 ADH4P08319 380 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 CHRNB4P30926 498 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 TNFAIP6P98066 277 aaPredicted RBP11.6□□□□□ -0.55
INO80E-203ENST00000540562 TDRG1Q3Y452 100 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 C1orf159Q96HA4 380 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 PIGBOS1A0A0B4J2F0 54 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 TOX4O94842 621 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 ZNF600Q6ZNG1 722 aa11.6□□□□□ -0.55
INO80E-203ENST00000540562 K7EN84 100 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 G0S2P27469 103 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 CCL17Q92583 94 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 SSBP3Q9BWW4 388 aaPredicted RBP11.59□□□□□ -0.55
INO80E-203ENST00000540562 OR51B2Q9Y5P1 312 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 SLC25A15Q9Y619 301 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 NCOR2Q9Y618 2525 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 PTPRBP23467 1997 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 J3QR06 171 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 PKIAP61925 76 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 SSBP2P81877 361 aaPredicted RBP11.59□□□□□ -0.55
INO80E-203ENST00000540562 SSX2Q16385 188 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 C17orf58Q2M2W7 97 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 CYB5R2Q6BCY4 276 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 PRR27Q6MZM9 219 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 MRPL54Q6P161 138 aaKnown RBP11.59□□□□□ -0.55
INO80E-203ENST00000540562 OR8I2Q8N0Y5 310 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 OR2T6Q8NHC8 308 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 CHD8Q9HCK8 2581 aa11.59□□□□□ -0.55
INO80E-203ENST00000540562 VDAC2P45880 294 aaPredicted RBP11.58□□□□□ -0.55
INO80E-203ENST00000540562 MORN5Q5VZ52 161 aa11.58□□□□□ -0.55
INO80E-203ENST00000540562 PQLC2Q6ZP29 291 aa11.58□□□□□ -0.55
INO80E-203ENST00000540562 EREGO14944 169 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 GCHFRP30047 84 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 OR10J1P30954 320 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 SUMO1P63165 101 aaKnown RBP11.58□□□□□ -0.56
INO80E-203ENST00000540562 ACTL10Q5JWF8 245 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 TEX38Q6PEX7 206 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 TEPPQ6URK8 271 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 OR10G8Q8NGN5 311 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 IGKV1OR2-108A0A075B7D4 117 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 TRGV10A0A0A0MS01 117 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 E7EUB6 86 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 IGHG3P01860 377 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 PAX5Q02548 391 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 OR4S2Q8NH73 311 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 PLEKHA3Q9HB20 300 aa11.58□□□□□ -0.56
INO80E-203ENST00000540562 TRAV34A0A0B4J273 112 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 RPL29P47914 159 aaKnown RBP11.57□□□□□ -0.56
INO80E-203ENST00000540562 JOSD1Q15040 202 aaPredicted RBP11.57□□□□□ -0.56
INO80E-203ENST00000540562 PPP1R35Q8TAP8 253 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 IDI2-AS1Q9NZ38 188 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 FCN1O00602 326 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 KRTCAP3Q53RY4 240 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 CENPVQ7Z7K6 275 aaPredicted RBP11.57□□□□□ -0.56
INO80E-203ENST00000540562 TMEM18Q96B42 140 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 MS4A10Q96PG2 267 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 NPVFQ9HCQ7 196 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 PLSCR4Q9NRQ2 329 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 JPT1Q9UK76 154 aa11.57□□□□□ -0.56
INO80E-203ENST00000540562 ANKHD1Q8IWZ3 2542 aaKnown RBP11.57□□□□□ -0.56
INO80E-203ENST00000540562 SSTP61278 116 aa11.56□□□□□ -0.56
INO80E-203ENST00000540562 BAGE3Q86Y29 109 aa11.56□□□□□ -0.56
INO80E-203ENST00000540562 BAGE2Q86Y30 109 aa11.56□□□□□ -0.56
INO80E-203ENST00000540562 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms