RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 KIR2DL5AQ8N109 375 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 OR13D1Q8NGV5 346 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 ORAOV1Q8WV07 137 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 IFI27L2Q9H2X8 130 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 TMEM106BQ9NUM4 274 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 WSB1Q9Y6I7 421 aa7.96□□□□□ -1.13
CLIP1-212ENST00000540304 ANKHD1Q8IWZ3 2542 aaKnown RBP7.96□□□□□ -1.14
CLIP1-212ENST00000540304 MED19A0JLT2 244 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-212ENST00000540304 LINC00473A8K010 186 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 FAM90A26D6RGX4 464 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 SEC11BP0C7V7 166 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 P0C879 139 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 G6PCP35575 357 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 ARF6P62330 175 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 LY6DQ14210 128 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 TMEM30BQ3MIR4 351 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 ODF3L1Q8IXM7 274 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 CCL17Q92583 94 aa7.96□□□□□ -1.14
CLIP1-212ENST00000540304 AURKAIP1Q9NWT8 199 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-212ENST00000540304 HRNRQ86YZ3 2850 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-212ENST00000540304 RNASEK-C17orf49H0YIS7 233 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 DFFBO76075 338 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 CST7O76096 145 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 KRASP01116 189 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 CD1BP29016 333 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 DUTP33316 252 aaKnown RBP7.95□□□□□ -1.14
CLIP1-212ENST00000540304 MST1LQ2TV78 715 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 C1orf194Q5T5A4 169 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 ZNF295-AS1Q8N0V1 137 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 OR5C1Q8NGR4 320 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 SPXQ9BT56 116 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 ABHD14AQ9BUJ0 271 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 MEGF9Q9H1U4 602 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 LINC00574Q9H8X3 128 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 KCNJ16Q9NPI9 418 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 IDI2-AS1Q9NZ38 188 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 SLC25A10Q9UBX3 287 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-212ENST00000540304 PIEZO1Q92508 2521 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 A0A1B0GW15 77 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 hADV38S2A0JD32 116 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 H3BP45 60 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 GNG7O60262 68 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 PROP1O75360 226 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 PLAUP00749 431 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 MAS1LP35410 378 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 ZNF134P52741 427 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 ERVFRD-1P60508 538 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 CDSNQ15517 529 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 UTF1Q5T230 341 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 SAMD13Q5VXD3 122 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 RNASEH2CQ8TDP1 164 aaKnown RBP7.95□□□□□ -1.14
CLIP1-212ENST00000540304 SLC35E1Q96K37 410 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 YPEL4Q96NS1 127 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 HRH4Q9H3N8 390 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 CISD1Q9NZ45 108 aaKnown RBP7.95□□□□□ -1.14
CLIP1-212ENST00000540304 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
CLIP1-212ENST00000540304 M0R1X1 148 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 ID1P41134 155 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 DYNLT3P51808 116 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 TAS2R30P59541 319 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 MEF2CQ06413 473 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-212ENST00000540304 MIDNQ504T8 468 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 TPTE2P1Q5T6R2 138 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 IL34Q6ZMJ4 242 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 TMEM217Q8N7C4 229 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 PARP11Q9NR21 331 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 LINC00312Q9Y6C7 94 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 ASH1LQ9NR48 2969 aaKnown RBP7.94□□□□□ -1.14
CLIP1-212ENST00000540304 PGPEP1LA6NFU8 196 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 RAB29O14966 203 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 TOMM40O96008 361 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 TRGC1P0CF51 173 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 IAPPP10997 89 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 RPL39P5Q59GN2 51 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 CT45A1Q5HYN5 189 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 H2BFWTQ7Z2G1 175 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 BOD1L2Q8IYS8 172 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-212ENST00000540304 CT45A3Q8NHU0 189 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 LEAP2Q969E1 77 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 SH3BGRL3Q9H299 93 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-212ENST00000540304 PSENENQ9NZ42 101 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 HSPB7Q9UBY9 170 aa7.94□□□□□ -1.14
CLIP1-212ENST00000540304 SVEP1Q4LDE5 3571 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 IGHV1-69-2A0A0G2JMI3 117 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 FAM157AC9JC47 383 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 TNFRSF13BO14836 293 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-212ENST00000540304 RBFOX2O43251 390 aaKnown RBP eCLIP7.93□□□□□ -1.143e-7■■■□□ 15.9
CLIP1-212ENST00000540304 FCGR3BO75015 233 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 TRGC2P03986 189 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 DANCRP0C864 163 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 UBE2KP61086 200 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 Q6ZRG5 221 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 MUC15Q8N387 334 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 ZNF439Q8NDP4 499 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 ATP5SQ99766 215 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 POLR3KQ9Y2Y1 108 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-212ENST00000540304 HCFC1P51610 2035 aa7.93□□□□□ -1.14
CLIP1-212ENST00000540304 IGHV2-70DA0A0C4DH43 119 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms