RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 GZMBP10144 247 aa11.21□□□□□ -0.61
BNIP3-202ENST00000540159 DIAPH2-AS1Q14236 149 aa11.21□□□□□ -0.61
BNIP3-202ENST00000540159 EFNB3Q15768 340 aa11.21□□□□□ -0.61
BNIP3-202ENST00000540159 C10orf55Q5SWW7 151 aa11.21□□□□□ -0.61
BNIP3-202ENST00000540159 H1FXQ92522 213 aaKnown RBP11.21□□□□□ -0.61
BNIP3-202ENST00000540159 C14orf144Q96I85 54 aa11.21□□□□□ -0.61
BNIP3-202ENST00000540159 PARD6GQ9BYG4 376 aaPredicted RBP11.21□□□□□ -0.61
BNIP3-202ENST00000540159 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
BNIP3-202ENST00000540159 MDFIC2A0A1B0GVS7 189 aa11.21□□□□□ -0.62
BNIP3-202ENST00000540159 OR7C2O60412 319 aa11.21□□□□□ -0.62
BNIP3-202ENST00000540159 FXYD3Q14802 87 aa11.21□□□□□ -0.62
BNIP3-202ENST00000540159 OR4S2Q8NH73 311 aa11.21□□□□□ -0.62
BNIP3-202ENST00000540159 TRGV10A0A0A0MS01 117 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 YPEL1O60688 119 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 RNF224P0DH78 156 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 TIMP3P35625 211 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 PSG5Q15238 335 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 USF2Q15853 346 aaPredicted RBP11.2□□□□□ -0.62
BNIP3-202ENST00000540159 DOLPP1Q86YN1 238 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 ACY3Q96HD9 319 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 YPEL2Q96QA6 119 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 OR51B2Q9Y5P1 312 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 IGHV3-72A0A0B4J1Y9 119 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 J3QR06 171 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 KLK10O43240 276 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 PLAUP00749 431 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 IGHV1-46P01743 117 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 LGALS4P56470 323 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 C1orf162Q8NEQ5 155 aaPredicted RBP11.2□□□□□ -0.62
BNIP3-202ENST00000540159 CCL17Q92583 94 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 SFRP2Q96HF1 295 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 SGK494Q96LW2 274 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 IGHV3-21A0A0B4J1V1 117 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 OR4A8P0C604 315 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 CHRNB4P30926 498 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 TEPPQ6URK8 271 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 OR9G1Q8NH87 305 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
BNIP3-202ENST00000540159 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
BNIP3-202ENST00000540159 IGKV1OR2-108A0A075B7D4 117 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 KBTBD11-OT1A0A1B0GTJ5 212 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 C15orf61A6NNL5 157 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 SCGB1D1O95968 90 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 REG1AP05451 166 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 DDTP30046 118 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 KCNIP4Q6PIL6 250 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 NPVFQ9HCQ7 196 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 ANKHD1Q8IWZ3 2542 aaKnown RBP11.19□□□□□ -0.62
BNIP3-202ENST00000540159 PTPRQQ9UMZ3 2332 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 E7EUB6 86 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 TM4SF5O14894 197 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 CRYBB3P26998 211 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 GCHFRP30047 84 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 ZNF90Q03938 601 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 KIAA1644Q3SXP7 199 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 C19orf35Q6ZS72 473 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 ZNF664Q8N3J9 261 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 RNF7Q9UBF6 113 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 CHD8Q9HCK8 2581 aa11.19□□□□□ -0.62
BNIP3-202ENST00000540159 NCOR2Q9Y618 2525 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 TSTD3H0UI37 97 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 K7EN84 100 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 STAG3L2P0CL84 134 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 STAG3L3P0CL85 134 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 ANAPC16Q96DE5 110 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 SLC35D1Q9NTN3 355 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 TRAV5A0A0B4J249 113 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 F2Z2F3 143 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 CA1P00915 261 aaPredicted RBP11.18□□□□□ -0.62
BNIP3-202ENST00000540159 ADMP35318 185 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 GLRXP35754 106 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 OPRK1P41145 380 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 CNN1P51911 297 aaKnown RBP11.18□□□□□ -0.62
BNIP3-202ENST00000540159 RPP30P78346 268 aaKnown RBP11.18□□□□□ -0.62
BNIP3-202ENST00000540159 LINC00469Q8N7U9 141 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
BNIP3-202ENST00000540159 RNASE7Q9H1E1 156 aaKnown RBP11.18□□□□□ -0.62
BNIP3-202ENST00000540159 RALYQ9UKM9 306 aaKnown RBP11.18□□□□□ -0.62
BNIP3-202ENST00000540159 PDE6DO43924 150 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 OR10J1P30954 320 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 HSPE1P61604 102 aaKnown RBP11.17□□□□□ -0.62
BNIP3-202ENST00000540159 SSBP2P81877 361 aaPredicted RBP11.17□□□□□ -0.62
BNIP3-202ENST00000540159 MORN5Q5VZ52 161 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 OR2T6Q8NHC8 308 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 GAFA1Q96PS6 74 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 CXorf1O96002 111 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 SELENOVP59797 346 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 ERVFC1-1P60608 527 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 ACTL10Q5JWF8 245 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 DDB2Q92466 427 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
BNIP3-202ENST00000540159 F2RL2O00254 374 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 CT45A6P0DMU7 189 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 CT45A5P0DMU8 189 aa11.17□□□□□ -0.62
BNIP3-202ENST00000540159 CT45A7P0DMV0 189 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms