RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 OR2Z1Q8NG97 314 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 HSPB9Q9BQS6 159 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 ARRDC1-AS1Q9H2J1 176 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 ZNF586Q9NXT0 402 aa10.91□□□□□ -0.66
UBE3B-209ENST00000539584 IGHV1-18A0A0C4DH31 117 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 KBTBD11-OT1A0A1B0GTJ5 212 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 LHBP01229 141 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 LINC00869P0C866 280 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 CD59P13987 128 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 IER3P46695 156 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 LINC00310P59036 64 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 PRCDQ00LT1 54 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 HLA-DRB5Q30154 266 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 C3orf36Q3SXR2 165 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 KRTCAP3Q53RY4 240 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 ZNF705AQ6ZN79 300 aaPredicted RBP10.9□□□□□ -0.66
UBE3B-209ENST00000539584 WFIKKN1Q96NZ8 548 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 LRFN3Q9BTN0 628 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 PLEKHA3Q9HB20 300 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 PPP1R14DQ9NXH3 145 aa10.9□□□□□ -0.66
UBE3B-209ENST00000539584 DOCK11Q5JSL3 2073 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 LNP1A1A4G5 178 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 SLC17A3O00476 420 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 CGAP01215 116 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 IGHV3-13P01766 116 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 TFF1P04155 84 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 GPX1P07203 203 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 PSG5Q15238 335 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 C2orf83Q53S99 150 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 CENPWQ5EE01 88 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 LRP11Q86VZ4 500 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 NABP2Q9BQ15 211 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 MRPL32Q9BYC8 188 aaKnown RBP10.89□□□□□ -0.67
UBE3B-209ENST00000539584 LINC00574Q9H8X3 128 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 IDI2-AS1Q9NZ38 188 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 OR51B2Q9Y5P1 312 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 A0A1B0GUS0 222 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 AHRRA9YTQ3 701 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 IGFBP2P18065 325 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 C17orf58Q2M2W7 97 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 CT45A1Q5HYN5 189 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 SPATA31B1PQ5VZV4 182 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 OR1L8Q8NGR8 309 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 OR5B3Q8NH48 314 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 CT45A3Q8NHU0 189 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 TMEM68Q96MH6 324 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 COMMD5Q9GZQ3 224 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 FAM234AQ9H0X4 552 aa10.89□□□□□ -0.67
UBE3B-209ENST00000539584 ZNF71Q9NQZ8 489 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-209ENST00000539584 J3QR06 171 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 TM4SF5O14894 197 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 FOXH1O75593 365 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 SAA2P0DJI9 122 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-209ENST00000539584 HNF1AP20823 631 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 GATA4P43694 442 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 PPOXP50336 477 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 MRPS11P82912 194 aaKnown RBP10.88□□□□□ -0.67
UBE3B-209ENST00000539584 LPAL2Q16609 132 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 VWA1Q6PCB0 445 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 OR8I2Q8N0Y5 310 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 FAM222BQ8WU58 562 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 CACNG8Q8WXS5 425 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 NAT8BQ9UHF3 227 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 DOCK7Q96N67 2140 aa10.88□□□□□ -0.67
UBE3B-209ENST00000539584 INS-IGF2F8WCM5 200 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 UPK2O00526 184 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 IGFL2Q6UWQ7 119 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 MIR17HGQ75NE6 70 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 BHLHA15Q7RTS1 189 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-209ENST00000539584 C9orf106Q8NAJ2 232 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 DKK4Q9UBT3 224 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 FZR1Q9UM11 496 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 PROCRQ9UNN8 238 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 SMIM27A0A1W2PRY6 76 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 AMY1AP04745 511 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 C8orf88P0DMB2 117 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 CRYBB3P26998 211 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 GLRXP35754 106 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 HOXA4Q00056 320 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-209ENST00000539584 TMEM136Q6ZRR5 245 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 ZNF439Q8NDP4 499 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 KCNS1Q96KK3 526 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 ATG101Q9BSB4 218 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 CHRDL1Q9BU40 450 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 SLC25A15Q9Y619 301 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 CACNA1DQ01668 2161 aa10.87□□□□□ -0.67
UBE3B-209ENST00000539584 TRAV17A0A0B4J275 112 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 ZNF253O75346 499 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 C19orf35Q6ZS72 473 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 ZNRF1Q8ND25 227 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 ST6GALNAC3Q8NDV1 305 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 VN1R17PQ8TDU5 208 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 WIPF2Q8TF74 440 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-209ENST00000539584 OR2V2Q96R30 315 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 GNB4Q9HAV0 340 aa10.86□□□□□ -0.67
UBE3B-209ENST00000539584 MRPL27Q9P0M9 148 aaKnown RBP10.86□□□□□ -0.67
UBE3B-209ENST00000539584 CFAP54Q96N23 3096 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms