RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 C1orf64Q8NEQ6 169 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 SLC7A6Q92536 515 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 TOMM6Q96B49 74 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 GPER1Q99527 375 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 PBDC1Q9BVG4 233 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 C16orf95Q9H693 158 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 PARVBQ9HBI1 364 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 TRPM3Q9HCF6 1732 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-210ENST00000539303 SMPXQ9UHP9 88 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 PRNDQ9UKY0 176 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 FUT9Q9Y231 359 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 HEY1Q9Y5J3 304 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 R4GN34 69 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 ABCC12Q96J65 1359 aa1.7□□□□□ -2.14
SNHG1-210ENST00000539303 CACNA1DQ01668 2161 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 SYNMO15061 1565 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 MIA2Q96PC5 1412 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 ZNF407Q9C0G0 2248 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 A0A1B0GU33 70 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 MDFIC2A0A1B0GVS7 189 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 GGT3PA6NGU5 568 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 C17orf98A8MV24 154 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 VGLL3A8MV65 326 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 CLDN25C9JDP6 229 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 H7C1C5 153 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 GPR31O00270 319 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 LEPROTO15243 131 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 SYNGR2O43760 224 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 MFSD11O43934 449 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 CDS2O95674 445 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 SPI1P17947 270 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST1H2BOP23527 126 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 BLVRBP30043 206 aaPredicted RBP1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST1H2BBP33778 126 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST1H2BDP58876 126 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 AP1S1P61966 158 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 LCN6P62502 163 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST1H2BCP62807 126 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 CCL20P78556 96 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 FLI1Q01543 452 aaPredicted RBP1.69□□□□□ -2.14
SNHG1-210ENST00000539303 AKR1C1Q04828 323 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST2H2BEQ16778 126 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.69□□□□□ -2.14
SNHG1-210ENST00000539303 RPL22L1Q6P5R6 122 aaKnown RBP1.69□□□□□ -2.14
SNHG1-210ENST00000539303 Q6Q795 121 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 ZNF767PQ75MW2 155 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 GRINAQ7Z429 371 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 ZNF439Q8NDP4 499 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 ZNF675Q8TD23 568 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 PYDC1Q8WXC3 89 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 FGF13Q92913 245 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST1H2BHQ93079 126 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 GPR146Q96CH1 333 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 CAPZA3Q96KX2 299 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 IGF2BP2-AS1Q96M15 143 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST1H2BNQ99877 126 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 HIST1H2BMQ99879 126 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 MIEN1Q9BRT3 115 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 DDA1Q9BW61 102 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 C20orf27Q9GZN8 174 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 BATF3Q9NR55 127 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 C19orf12Q9NSK7 152 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 TXNL4BQ9NX01 149 aaKnown RBP1.69□□□□□ -2.14
SNHG1-210ENST00000539303 IL36BQ9NZH7 164 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 SSR3Q9UNL2 185 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 COL18A1P39060 1754 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 MAST2Q6P0Q8 1798 aa1.69□□□□□ -2.14
SNHG1-210ENST00000539303 KIF1BO60333 1816 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 NUP160Q12769 1436 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 LOC105371267A0A1B0GV96 52 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 AIPO00170 330 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 CPSF4O95639 269 aaKnown RBP1.68□□□□□ -2.14
SNHG1-210ENST00000539303 NPYP01303 97 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 IFNA10P01566 189 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 C1QBP02746 253 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 TFPTP0C1Z6 253 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 GZMBP10144 247 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 HLA-DMBP28068 263 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 ATP5G3P48201 142 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 MEF2BQ02080 365 aaPredicted RBP1.68□□□□□ -2.14
SNHG1-210ENST00000539303 RPL18Q07020 188 aaKnown RBP1.68□□□□□ -2.14
SNHG1-210ENST00000539303 MOGQ16653 247 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 PYDC2Q56P42 97 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 ZNF705AQ6ZN79 300 aaPredicted RBP1.68□□□□□ -2.14
SNHG1-210ENST00000539303 C12orf45Q8N5I9 185 aaPredicted RBP1.68□□□□□ -2.14
SNHG1-210ENST00000539303 FAM24BQ8N5W8 94 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 OR13C4Q8NGS5 318 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 OR10K1Q8NGX5 313 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 CLDND2Q8NHS1 167 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 SMCR5Q8TEV8 140 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 H1FXQ92522 213 aaKnown RBP1.68□□□□□ -2.14
SNHG1-210ENST00000539303 C2orf50Q96LR7 162 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 HIGD2AQ9BW72 106 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 SH3BGRL3Q9H299 93 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 MIXL1Q9H2W2 232 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 XAGE1AQ9HD64 81 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 C8orf4Q9NR00 106 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 LYRM2Q9NU23 88 aaPredicted RBP1.68□□□□□ -2.14
SNHG1-210ENST00000539303 ACER3Q9NUN7 267 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 TVP23BQ9NYZ1 205 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms