RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 TMEM61Q8N0U2 210 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 CADM3Q8N126 398 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 DEFB125Q8N687 156 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 GVQW1Q8N7I0 195 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 OR5AP2Q8NGF4 316 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 ZNF502Q8TBZ5 544 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 ATP6V0BQ99437 205 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 QTRT1Q9BXR0 403 aaKnown RBP6.5□□□□□ -1.37
DDB1-212ENST00000538470 COMMD5Q9GZQ3 224 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 WFDC10AQ9H1F0 79 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 RETNQ9HD89 108 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 IFT46Q9NQC8 304 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 TMEM140Q9NV12 185 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 UFC1Q9Y3C8 167 aa6.5□□□□□ -1.37
DDB1-212ENST00000538470 ZNF320A2RRD8 509 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 RBMY1BA6NDE4 496 aaKnown RBP6.49□□□□□ -1.37
DDB1-212ENST00000538470 RBMY1EA6NEQ0 496 aaKnown RBP6.49□□□□□ -1.37
DDB1-212ENST00000538470 MFSD2BA6NFX1 497 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 SULT1C2O00338 296 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 UPK2O00526 184 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 RGS5O15539 181 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 S1PR2O95136 353 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 IGHV3-23P01764 117 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 APOA1P02647 267 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 REG1AP05451 166 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 RBMY1DP0C7P1 496 aaKnown RBP6.49□□□□□ -1.37
DDB1-212ENST00000538470 C8orf88P0DMB2 117 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 ELK1P19419 428 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 EDN2P20800 178 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 PTBP1P26599 531 aaKnown RBP eCLIP6.49□□□□□ -1.37
DDB1-212ENST00000538470 FXYD4P59646 89 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 ERVK-16P61578 105 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 RNASE12Q5GAN4 147 aaKnown RBP6.49□□□□□ -1.37
DDB1-212ENST00000538470 AADACL3Q5VUY0 350 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 BTNL8Q6UX41 500 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 ZNF818PQ6ZRF7 136 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 TMEM17Q86X19 198 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 GDPD1Q8N9F7 314 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 DMBX1Q8NFW5 382 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 OR52B4Q8NGK2 314 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 OR51H1Q8NH63 302 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 VN1R17PQ8TDU5 208 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 CACNG8Q8WXS5 425 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 TMEM190Q8WZ59 177 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 GPHA2Q96T91 129 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 FAM110AQ9BQ89 295 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 GGTLC1Q9BX51 225 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 ZNF436Q9C0F3 470 aaPredicted RBP6.49□□□□□ -1.37
DDB1-212ENST00000538470 MRPL27Q9P0M9 148 aaKnown RBP6.49□□□□□ -1.37
DDB1-212ENST00000538470 MLXQ9UH92 298 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 ANAPC10Q9UM13 185 aa6.49□□□□□ -1.37
DDB1-212ENST00000538470 LOC102724200A0A096LPH7 203 aaPredicted RBP6.48□□□□□ -1.37
DDB1-212ENST00000538470 SMIM31A0A1B0GVY4 71 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 MARCH11A6NNE9 402 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 TGOLN2O43493 480 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 CLEC3BP05452 202 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 TRAPPC2P0DI81 140 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 TRAPPC2BP0DI82 140 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 GPR183P32249 361 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 TAS2R46P59540 309 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 SPSB3Q6PJ21 355 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 PLET1Q6UQ28 207 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 UXS1Q8NBZ7 420 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 OR1L6Q8NGR2 347 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 DYNC2LI1Q8TCX1 351 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 LSM10Q969L4 123 aaKnown RBP6.48□□□□□ -1.37
DDB1-212ENST00000538470 MOB3AQ96BX8 217 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 BSCL2Q96G97 398 aaPredicted RBP6.48□□□□□ -1.37
DDB1-212ENST00000538470 SPAG8Q99932 426 aaPredicted RBP6.48□□□□□ -1.37
DDB1-212ENST00000538470 BCL7BQ9BQE9 202 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 C6orf62Q9GZU0 229 aaPredicted RBP6.48□□□□□ -1.37
DDB1-212ENST00000538470 EHFQ9NZC4 300 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 CCDC59Q9P031 241 aaKnown RBP6.48□□□□□ -1.37
DDB1-212ENST00000538470 EXTL2Q9UBQ6 330 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 S4R3C0 116 aa6.48□□□□□ -1.37
DDB1-212ENST00000538470 HYDINQ4G0P3 5121 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 TRAV3A0A0B4J244 114 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 SCAF4O95104 1147 aaKnown RBP6.47□□□□□ -1.37
DDB1-212ENST00000538470 RLN1P04808 185 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 SERPINE2P07093 398 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 F2RP25116 425 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 GNRHRP30968 328 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 PRSS3P35030 304 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 DHRS11Q6UWP2 260 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 UNQ9165/PRO28630Q6UXU0 137 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 RBPMS2Q6ZRY4 209 aaKnown RBP6.47□□□□□ -1.37
DDB1-212ENST00000538470 CMTM1Q8IZ96 169 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 SLC38A6Q8IZM9 456 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 OR1L8Q8NGR8 309 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 OR5H2Q8NGV7 314 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 TSC22D3Q99576 134 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 MIXL1Q9H2W2 232 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 C5orf66Q9H5L9 145 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 DAZ1Q9NQZ3 744 aaKnown RBP6.47□□□□□ -1.37
DDB1-212ENST00000538470 FAM212BQ9NTI7 297 aaPredicted RBP6.47□□□□□ -1.37
DDB1-212ENST00000538470 GAR1Q9NY12 217 aaKnown RBP6.47□□□□□ -1.37
DDB1-212ENST00000538470 TP53TG1Q9Y2A0 90 aa6.47□□□□□ -1.37
DDB1-212ENST00000538470 F11RQ9Y624 299 aaKnown RBP6.47□□□□□ -1.37
DDB1-212ENST00000538470 GPR31O00270 319 aa6.46□□□□□ -1.38
DDB1-212ENST00000538470 NDUFA4O00483 81 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms