RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 A0A0G2JLM5 398 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 A0A1B0GW55 424 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ODF3BA8MYP8 253 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 C12orf77C9JDV5 145 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 H3BSH0 61 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 BUB1B-PAK6H3BSN5 160 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 RAB27BO00194 218 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 PRAF2O60831 178 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SERPINE2P07093 398 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUX4L2P0CJ85 424 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUX4L3P0CJ86 424 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUX4L4P0CJ87 422 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUX4L5P0CJ88 424 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUX4L6P0CJ89 424 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUX4L7P0CJ90 424 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 HOXB4P17483 251 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 AZU1P20160 251 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 F2RL1P55085 397 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 S100A10P60903 97 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 RND3P61587 244 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 QRFPP83859 136 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF79Q15937 498 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ANKRD55Q3KP44 614 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 PIGYQ3MUY2 71 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF260Q3ZCT1 412 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 FBLN7Q53RD9 439 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 GFI1BQ5VTD9 330 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 TMEM268Q5VZI3 342 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF705AQ6ZN79 300 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 TMEM182Q6ZP80 229 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 LYPD6Q86Y78 171 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 H1FOOQ8IZA3 346 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF645Q8N7E2 425 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZDHHC22Q8N966 263 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 TEX45Q8NA69 505 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUSP18Q8NEJ0 188 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 CASTOR1Q8WTX7 329 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SMIM4Q8WVI0 70 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 NUDCD2Q8WVJ2 157 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 IL1F10Q8WWZ1 152 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 IL22RA2Q969J5 263 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 PTH2Q96A98 100 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 FLYWCH2Q96CP2 140 aaKnown RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SLC35E1Q96K37 410 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF488Q96MN9 340 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 TBX15Q96SF7 602 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 AURKAIP1Q9NWT8 199 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 EHFQ9NZC4 300 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZNRD1Q9P1U0 126 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUX4Q9UBX2 424 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 MTFP1Q9UDX5 166 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 V9GYH0 126 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 RAI1Q7Z5J4 1906 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 FREM1Q5H8C1 2179 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SMCO3A2RU48 225 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 A6NIN4 97 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF705GA8MUZ8 300 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DUS4LO95620 317 aaKnown RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SNRPBP14678 240 aaKnown RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 MMP9P14780 707 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 CXCL3P19876 107 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 RBMXP38159 391 aaKnown RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 VDAC2P45880 294 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 RPS20P60866 119 aaKnown RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 RPS16P62249 146 aaKnown RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 PAX2Q02962 417 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 AKR1C1Q04828 323 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 CXorf66Q5JRM2 361 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 TMEM255AQ5JRV8 349 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ZNF57Q68EA5 555 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 OR1N2Q8NGR9 330 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 MARCH1Q8TCQ1 289 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 GALNT14Q96FL9 552 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ACTR3CQ9C0K3 210 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 C16orf95Q9H693 158 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 PRNDQ9UKY0 176 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 FLVCR2Q9UPI3 526 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 TCF19Q9Y242 345 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 C5orf42Q9H799 3197 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 CENPVL3A0A0U1RRI6 287 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 CLPSL1A2RUU4 121 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 INMT-MINDY4F8WBC2 141 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 MPPED1O15442 326 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 HPRT1P00492 218 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 ELANEP08246 267 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 CGB3P0DN86 165 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 CGB7P0DN87 165 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 HKR1P10072 659 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SLC2A2P11168 524 aaPredicted RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 CXCL2P19875 107 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SAA4P35542 130 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 DLX6P56179 175 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 UBA52P62987 128 aaKnown RBP2.91□□□□□ -1.94
PTPN22-211ENST00000538253 SMAGPQ0VAQ4 97 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 MORN2Q502X0 79 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 TEX38Q6PEX7 206 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 C6orf201Q7Z4U5 140 aa2.91□□□□□ -1.94
PTPN22-211ENST00000538253 C1QL4Q86Z23 238 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms