RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 YPEL2Q96QA6 119 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 SNHG12Q9BXW3 62 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 SVEP1Q4LDE5 3571 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 MMP23AO75900 390 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 NDUFB4O95168 129 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 CD33P20138 364 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 CD40P25942 277 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 CDC34P49427 236 aaPredicted RBP10.59□□□□□ -0.71
TRIM25-202ENST00000537230 IQCJQ1A5X6 159 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 PRAMEF5Q5TYX0 476 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 KCNIP4Q6PIL6 250 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 TRAT1Q6PIZ9 186 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 CCL13Q99616 98 aa10.59□□□□□ -0.71
TRIM25-202ENST00000537230 PLXNB1O43157 2135 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 NAV3Q8IVL0 2385 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 RRHO14718 337 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 VENTXO95231 258 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 TCTEX1D1Q8N7M0 179 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 FAM57AQ8TBR7 257 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 TMEM204Q9BSN7 226 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 TRAPPC1Q9Y5R8 145 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 SAA2-SAA4A0A096LPE2 208 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 HPRT1P00492 218 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 SAA2P0DJI9 122 aaPredicted RBP10.58□□□□□ -0.72
TRIM25-202ENST00000537230 RPL15P61313 204 aaKnown RBP10.58□□□□□ -0.72
TRIM25-202ENST00000537230 CCL8P80075 99 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 TNFAIP6P98066 277 aaPredicted RBP10.58□□□□□ -0.72
TRIM25-202ENST00000537230 ABHD17AQ96GS6 310 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 SFXN3Q9BWM7 321 aa10.58□□□□□ -0.72
TRIM25-202ENST00000537230 MYOD1P15172 320 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 ABHD12Q8N2K0 398 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 FKBP11Q9NYL4 201 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 A0A0G2JNJ9 132 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 RBFOX2O43251 390 aaKnown RBP eCLIP10.57□□□□□ -0.721e-9■■□□□ 14.4
TRIM25-202ENST00000537230 HNF1AP20823 631 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 RELBQ01201 579 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 VWC2Q2TAL6 325 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 STUMQ69YW2 141 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 DOLPP1Q86YN1 238 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 DDB2Q92466 427 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 GAFA1Q96PS6 74 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 CIB3Q96Q77 187 aaPredicted RBP10.57□□□□□ -0.72
TRIM25-202ENST00000537230 PATZ1Q9HBE1 687 aaKnown RBP10.57□□□□□ -0.72
TRIM25-202ENST00000537230 TMEM140Q9NV12 185 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 RNF7Q9UBF6 113 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 Q9UFV3 132 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 ANKHD1Q8IWZ3 2542 aaKnown RBP10.57□□□□□ -0.72
TRIM25-202ENST00000537230 CRYABP02511 175 aaKnown RBP10.57□□□□□ -0.72
TRIM25-202ENST00000537230 GATA4P43694 442 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 LCN2P80188 198 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 SGMS2Q8NHU3 365 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 FAM222BQ8WU58 562 aa10.57□□□□□ -0.72
TRIM25-202ENST00000537230 POLR3KQ9Y2Y1 108 aaPredicted RBP10.57□□□□□ -0.72
TRIM25-202ENST00000537230 TRBV20OR9-2A0A075B6H5 130 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 SOX15O60248 233 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 TMEM144Q7Z5S9 345 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 OR4A16Q8NH70 328 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 SDSLQ96GA7 329 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 S1PR3Q99500 378 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 CHD8Q9HCK8 2581 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 KBTBD11-OT1A0A1B0GTJ5 212 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 GRIFINA4D1Z8 144 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 HEYLQ9NQ87 328 aaPredicted RBP10.56□□□□□ -0.72
TRIM25-202ENST00000537230 PXMP4Q9Y6I8 212 aa10.56□□□□□ -0.72
TRIM25-202ENST00000537230 CD1BP29016 333 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 VDAC2P45880 294 aaPredicted RBP10.55□□□□□ -0.72
TRIM25-202ENST00000537230 WFDC8Q8IUA0 241 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 LYG1Q8N1E2 194 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 IL19Q9UHD0 177 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 HRNRQ86YZ3 2850 aaPredicted RBP10.55□□□□□ -0.72
TRIM25-202ENST00000537230 C17orf112F2Z3M2 114 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 GFRA3O60609 400 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 FCN3O75636 299 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 ERVFC1-1P60608 527 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 Q8NA96 180 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 MS4A10Q96PG2 267 aa10.55□□□□□ -0.72
TRIM25-202ENST00000537230 DPRXA6NFQ7 191 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 TMPRSS2O15393 492 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 TDGF1P3P51864 188 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 PRR30Q53SZ7 412 aaPredicted RBP10.54□□□□□ -0.72
TRIM25-202ENST00000537230 SVIPQ8NHG7 77 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 NAGKQ9UJ70 344 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 WDR83OSQ9Y284 106 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 PRSS46E5RG02 174 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 PDE6DO43924 150 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 ADMP35318 185 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 THBS3P49746 956 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 C3orf36Q3SXR2 165 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 KRTCAP3Q53RY4 240 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 C1orf194Q5T5A4 169 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 C1orf159Q96HA4 380 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 SFRP2Q96HF1 295 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 IMMP2LQ96T52 175 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 ELOVL5Q9NYP7 299 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 NCOR2Q9Y618 2525 aa10.54□□□□□ -0.72
TRIM25-202ENST00000537230 ZNF705FA8MVS1 300 aaPredicted RBP10.54□□□□□ -0.72
TRIM25-202ENST00000537230 THBDP07204 575 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms