RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 REG1AP05451 166 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 CSN3P07498 182 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 TRAPPC2P0DI81 140 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 TRAPPC2BP0DI82 140 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 DEFA4P12838 97 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 RPA2P15927 270 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 MECP2P51608 486 aaKnown RBP13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 WT1-ASQ06250 92 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 STEAP1BQ6NZ63 245 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 OR5B3Q8NH48 314 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 DIRAS2Q96HU8 199 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 FKBP11Q9NYL4 201 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 PRNDQ9UKY0 176 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 SMAD5-AS1Q9Y6J3 95 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 CEPT1Q9Y6K0 416 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 TRBV7-1A0A0A6YYK4 115 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 C15orf61A6NNL5 157 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 NOL3O60936 208 aaKnown RBP13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 GGCTO75223 188 aaKnown RBP13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 SNAPC5O75971 98 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 LY86O95711 162 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 RAB3DO95716 219 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 SERPINE2P07093 398 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 NHLRC4P0CG21 123 aaPredicted RBP13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 GDPD1Q8N9F7 314 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 MRGPRFQ96AM1 343 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 CXorf58Q96LI9 332 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 SOSTQ9BQB4 213 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 PEMTQ9UBM1 199 aa13.09□□□□□ -0.31
SFSWAP-205ENST00000537164 H0Y980 276 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 LGALS9O00182 355 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 GSTZ1O43708 216 aaPredicted RBP13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 PIGPP57054 158 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 MEF2DQ14814 521 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 GPHB5Q86YW7 130 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 ZFAND1Q8TCF1 268 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 LSM10Q969L4 123 aaKnown RBP13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 EEF1AKMT3Q96AZ1 226 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 THYN1Q9P016 225 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 NSG2Q9Y328 171 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 OR51B2Q9Y5P1 312 aa13.08□□□□□ -0.32
SFSWAP-205ENST00000537164 MFSD2BA6NFX1 497 aa13.07□□□□□ -0.32
SFSWAP-205ENST00000537164 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
SFSWAP-205ENST00000537164 PPP5D1E7EU14 171 aa13.07□□□□□ -0.32
SFSWAP-205ENST00000537164 CYB5BO43169 146 aa13.07□□□□□ -0.32
SFSWAP-205ENST00000537164 OR13C7P0DN81 318 aa13.07□□□□□ -0.32
SFSWAP-205ENST00000537164 PGAM2P15259 253 aa13.07□□□□□ -0.32
SFSWAP-205ENST00000537164 IL18Q14116 193 aa13.07□□□□□ -0.32
SFSWAP-205ENST00000537164 C6orf62Q9GZU0 229 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-205ENST00000537164 B3GALNT1O75752 331 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 P0C879 139 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 PI3P19957 117 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 TNFSF8P32971 234 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 ARL3P36405 182 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 SURF2Q15527 256 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 C11orf87Q6NUJ2 197 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 CLEC19AQ6UXS0 136 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 ADAMTSL5Q6ZMM2 481 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 H2BFWTQ7Z2G1 175 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 HAPLN4Q86UW8 402 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 Q8N1Y9 231 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 OR13C8Q8NGS7 320 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 OR2K2Q8NGT1 345 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 ZNF502Q8TBZ5 544 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 VN1R17PQ8TDU5 208 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 TMEM56Q96MV1 263 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 TP53RKQ96S44 253 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 ATP6V0BQ99437 205 aa13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 THAP7Q9BT49 309 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 RSL24D1Q9UHA3 163 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 F11RQ9Y624 299 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-205ENST00000537164 C3orf85A0A1B0GTC6 90 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 ANKRD20A5PA0PJZ0 165 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 OR2C1O95371 312 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 CTSDP07339 412 aaPredicted RBP13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 AKAIN1P0CW23 69 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 PPP5CP53041 499 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 SCGB2B2Q4G0G5 96 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 Q8N402 240 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 CCDC71LQ8N9Z2 235 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 OR1L6Q8NGR2 347 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 MCFD2Q8NI22 146 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 MARCH1Q8TCQ1 289 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 RBM38Q9H0Z9 239 aaKnown RBP13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 S4R3C0 116 aa13.05□□□□□ -0.32
SFSWAP-205ENST00000537164 A8MWP6 167 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 A8MZ25 164 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 IGHV3-23P01764 117 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 HLA-AP01891 365 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 CLEC3BP05452 202 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 UCP1P25874 307 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 MFAP2P55001 183 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 LCN12Q6JVE5 192 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 OR4C16Q8NGL9 310 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 OR4A16Q8NH70 328 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 SLC2A8Q9NY64 477 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 COPZ2Q9P299 210 aa13.04□□□□□ -0.32
SFSWAP-205ENST00000537164 FABP12A6NFH5 140 aa13.03□□□□□ -0.32
SFSWAP-205ENST00000537164 C2orf70A6NJV1 201 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms