RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SAA2-SAA4A0A096LPE2 208 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 VSTM5A8MXK1 200 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 SAA2P0DJI9 122 aaPredicted RBP6.52□□□□□ -1.37
COL21A1-212ENST00000535941 CXorf66Q5JRM2 361 aaPredicted RBP6.52□□□□□ -1.37
COL21A1-212ENST00000535941 COL5A1-AS1Q5SY13 56 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 ZNF695Q8IW36 515 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 OR51H1Q8NH63 302 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 NEU4Q8WWR8 484 aaPredicted RBP6.52□□□□□ -1.37
COL21A1-212ENST00000535941 IL1F10Q8WWZ1 152 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 TRGV10A0A0A0MS01 117 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 S1PR2O95136 353 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 CDKN1BP46527 198 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 FGF8P55075 233 aaPredicted RBP6.52□□□□□ -1.37
COL21A1-212ENST00000535941 EWSR1Q01844 656 aaKnown RBP eCLIP6.52□□□□□ -1.37
COL21A1-212ENST00000535941 BSXQ3C1V8 233 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 WDR73Q6P4I2 378 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 TMEM182Q6ZP80 229 aaPredicted RBP6.52□□□□□ -1.37
COL21A1-212ENST00000535941 FKBP11Q9NYL4 201 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 LAMP3Q9UQV4 416 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 STRAPQ9Y3F4 350 aaKnown RBP6.52□□□□□ -1.37
COL21A1-212ENST00000535941 PLCE1Q9P212 2302 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 hADV38S2A0JD32 116 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 ZNF320A2RRD8 509 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 RBFOX3A6NFN3 312 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 CLDN34H7C241 214 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 IGLV1-47P01700 117 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 SRSF1Q07955 248 aaKnown RBP eCLIP6.51□□□□□ -1.37
COL21A1-212ENST00000535941 C1orf194Q5T5A4 169 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 TNFRSF14Q92956 283 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 ZFP30Q9Y2G7 519 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 SVILO95425 2214 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 CADP27708 2225 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 HPRT1P00492 218 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 CT45A6P0DMU7 189 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 CT45A5P0DMU8 189 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 CT45A7P0DMV0 189 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 S100GP29377 79 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 BRS3P32247 399 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 NKX2-1P43699 371 aaPredicted RBP6.51□□□□□ -1.37
COL21A1-212ENST00000535941 Q8N7P7 452 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 OR5AN1Q8NGI8 311 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 BBC3Q96PG8 261 aaPredicted RBP6.51□□□□□ -1.37
COL21A1-212ENST00000535941 RAB40CQ96S21 281 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 RNF2Q99496 336 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 PCGF1Q9BSM1 259 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 ZNF430Q9H8G1 570 aaPredicted RBP6.51□□□□□ -1.37
COL21A1-212ENST00000535941 USP24Q9UPU5 2620 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 AKAP9Q99996 3911 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 SEC11BP0C7V7 166 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 RELBQ01201 579 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 OR2C3Q8N628 320 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 TMEM252Q8N6L7 170 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 KIR3DL3Q8N743 410 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 CYB561D1Q8N8Q1 229 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 SLC24A4Q8NFF2 622 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 UBALD1Q8TB05 177 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 TMEM14BQ9NUH8 114 aa6.51□□□□□ -1.37
COL21A1-212ENST00000535941 FOXA2Q9Y261 457 aaPredicted RBP6.51□□□□□ -1.37
COL21A1-212ENST00000535941 IGHV3-43A0A0B4J1X8 118 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 IGHV3-43DP0DP04 118 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 VDAC2P45880 294 aaPredicted RBP6.5□□□□□ -1.37
COL21A1-212ENST00000535941 CATR1Q13166 79 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 EDDM3AQ14507 147 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 HCP5Q6MZN7 132 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 OR4X1Q8NH49 305 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 ZNF714Q96N38 554 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 VAX2Q9UIW0 290 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 PSG11Q9UQ72 335 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 YLPM1P49750 1951 aaKnown RBP6.5□□□□□ -1.37
COL21A1-212ENST00000535941 ODF3BA8MYP8 253 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 IGLV2-23P01705 113 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 CRYGBP07316 175 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 THBS3P49746 956 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 RIPPLY3P57055 190 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 UBE2G2P60604 165 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 RPL39P5Q59GN2 51 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 C1orf159Q96HA4 380 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 ADTRPQ96IZ2 230 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
COL21A1-212ENST00000535941 SEPSECSQ9HD40 501 aaKnown RBP6.5□□□□□ -1.37
COL21A1-212ENST00000535941 PKD1L2Q7Z442 2459 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 VWC2LB2RUY7 222 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 CLDN1O95832 211 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 OR9G9P0C7N8 305 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 IGHV1-8P0DP01 117 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 LINC00205P59089 165 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 ATP6V1FQ16864 119 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 PRAMEF5Q5TYX0 476 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 SH3BGRL3Q9H299 93 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 CACNG5Q9UF02 275 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 NAGKQ9UJ70 344 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 NBPF19A0A087WUL8 3843 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 A0A1B0GW64 132 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 TMPRSS2O15393 492 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 OR10J1P30954 320 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 ELLP55199 621 aaPredicted RBP6.49□□□□□ -1.37
COL21A1-212ENST00000535941 TOMM20LQ6UXN7 152 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 TMEM170AQ8WVE7 144 aa6.49□□□□□ -1.37
COL21A1-212ENST00000535941 TMEM37Q8WXS4 190 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms