RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CCL25O15444 150 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 TNFSF12O43508 249 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 SYNGR3O43761 229 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 HYPMO75409 117 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 TRAPPC6AO75865 159 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 SCTP09683 121 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 OR10J4P0C629 311 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 LINC00869P0C866 280 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 TSPOP30536 169 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 CTRLP40313 264 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 OPRK1P41145 380 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 LHX2P50458 406 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 BPIFB3P59826 476 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 PRSS8Q16651 343 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 SNAI3Q3KNW1 292 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 TIGITQ495A1 244 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 PHYHD1Q5SRE7 291 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 ZNF324BQ6AW86 544 aaPredicted RBP5.46□□□□□ -1.54
USP28-202ENST00000535607 ETFRF1Q6IPR1 90 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 PRR27Q6MZM9 219 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 ANKRD37Q7Z713 158 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 Q8IYB0 196 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 ZDHHC23Q8IYP9 409 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 SCCPDHQ8NBX0 429 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 OR5A2Q8NGI9 324 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 FAM216AQ8WUB2 273 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 DYRK2Q92630 601 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 SPACA9Q96E40 222 aaPredicted RBP5.46□□□□□ -1.54
USP28-202ENST00000535607 PMCHL2Q9BQD1 86 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 TMEM160Q9NX00 188 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 NAT8BQ9UHF3 227 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 CFAP54Q96N23 3096 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 UNC13CQ8NB66 2214 aa5.46□□□□□ -1.54
USP28-202ENST00000535607 FAM186AA6NE01 2351 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 TRGV10A0A0A0MS01 117 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 IGKV1D-13A0A0B4J2D9 117 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 IGKV1-12A0A0C4DH73 117 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 GRIFINA4D1Z8 144 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 OR5B21A6NL26 309 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 LRRC30A6NM36 301 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 J3KRW8 73 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 RHODO00212 210 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 ZNF324O75467 553 aaPredicted RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 RBMXL2O75526 392 aaKnown RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 TNFSF15O95150 251 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 NXPH2O95156 264 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 IGKV1D-12P01611 117 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 IGKV1-13P0DP09 117 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 AREGP15514 252 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 IER3P46695 156 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 TFPI2P48307 235 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 DSCR4P56555 118 aaPredicted RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 PROK1P58294 105 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 GNB1P62873 340 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 PLGLB1Q02325 96 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 ARL16Q0P5N6 197 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 CEACAM21Q3KPI0 293 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 KRTAP27-1Q3LI81 207 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 LRRC10Q5BKY1 277 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 PRAMEF20Q5VT98 475 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 FAM69BQ5VUD6 431 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 RAET1LQ5VY80 246 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 GTF2H5Q6ZYL4 71 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 H2BFWTQ7Z2G1 175 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 MRPL21Q7Z2W9 205 aaKnown RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 MYPOPQ86VE0 399 aaPredicted RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 PRIMA1Q86XR5 153 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 CALHM1Q8IU99 346 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 WDFY1Q8IWB7 410 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 MMD2Q8IY49 270 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 STPG4Q8N801 248 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 FADS6Q8N9I5 356 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 OR2M7Q8NG81 312 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 OR10G3Q8NGC4 313 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 OR4P4Q8NGL7 312 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 RNASE8Q8TDE3 154 aaKnown RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 APOBEC3DQ96AK3 386 aaPredicted RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 AP1S3Q96PC3 154 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 FAM103A1Q9BTL3 118 aaKnown RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 SFXN3Q9BWM7 321 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 DEFB126Q9BYW3 111 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 ST20Q9HBF5 79 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 ZNF331Q9NQX6 463 aaPredicted RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 OSTCQ9NRP0 149 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 TMEM167BQ9NRX6 74 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 TMEM38BQ9NVV0 291 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 OCIAD1Q9NX40 245 aa5.45□□□□□ -1.54
USP28-202ENST00000535607 RIF1Q5UIP0 2472 aaKnown RBP5.45□□□□□ -1.54
USP28-202ENST00000535607 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 SPAARA0A1B0GVQ0 90 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 ANKRD30BLA7E2S9 258 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 C17orf51A8MQB3 221 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 C21orf140B9A014 251 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.44□□□□□ -1.54
USP28-202ENST00000535607 M0R1X1 148 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 CDIPTO14735 213 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 HSBP1O75506 76 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 CLDN14O95500 239 aa5.44□□□□□ -1.54
USP28-202ENST00000535607 IGHEP01854 428 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms