RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 TPRX1Q8N7U7 411 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 PTGR2Q8N8N7 351 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-201ENST00000535076 OTOSQ8NHW6 89 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 ZNF563Q8TA94 476 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 FAM213BQ8TBF2 198 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 RAB37Q96AX2 223 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 ADAT3Q96EY9 351 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-201ENST00000535076 ZNF488Q96MN9 340 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 PRELID3AQ96N28 172 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 OR2A5Q96R48 311 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 AMELYQ99218 206 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 CLEC7AQ9BXN2 247 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 C5orf66Q9H5L9 145 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 DLL3Q9NYJ7 618 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 PRO0461Q9UI25 63 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 POLR1DQ9Y2S0 133 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 SIP14410 1827 aa4.29□□□□□ -1.72
SNHG1-201ENST00000535076 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.29□□□□□ -1.72
SNHG1-201ENST00000535076 SHISA9B4DS77 424 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 E9PLD3 99 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 C11orf98E9PRG8 122 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 M0R129 80 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 HCRTO43612 131 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 NTN1O95631 604 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 IGHV3-7P01780 117 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 IGKV5-2P06315 115 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 OR5AL1P0C617 328 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 ZNF708P17019 499 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 RPL35AP18077 110 aaKnown RBP4.28□□□□□ -1.72
SNHG1-201ENST00000535076 NMUP48645 174 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 PSMB3P49720 205 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 UBE2G1P62253 170 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 RPL23P62829 140 aaKnown RBP4.28□□□□□ -1.72
SNHG1-201ENST00000535076 RRN3P1Q2M238 152 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 CEACAM16Q2WEN9 425 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 SPANXN4Q5MJ08 99 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 IBA57Q5T440 356 aaKnown RBP4.28□□□□□ -1.72
SNHG1-201ENST00000535076 NCBP2-AS2Q69YL0 99 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 OR4C11Q6IEV9 310 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 Q6ZSR3 168 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 PRIMA1Q86XR5 153 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 C3orf22Q8N5N4 141 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 RFLNBQ8N5W9 214 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 SMRP1Q8NCR6 262 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 MDS2Q8NDY4 140 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 RPS4Y2Q8TD47 263 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 CT55Q8WUE5 264 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 CRYGNQ8WXF5 182 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 ATXN7L3BQ96GX2 97 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 SLC25A44Q96H78 314 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-201ENST00000535076 ABHD14BQ96IU4 210 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 GPR21Q99679 349 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 C20orf78Q9BR46 151 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 PBOV1Q9GZY1 135 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 TMEM222Q9H0R3 208 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 ZMAT4Q9H898 229 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 TECRQ9NZ01 308 aaKnown RBP4.28□□□□□ -1.72
SNHG1-201ENST00000535076 ZNF835Q9Y2P0 537 aa4.28□□□□□ -1.72
SNHG1-201ENST00000535076 TNRC6CQ9HCJ0 1690 aaKnown RBP4.28□□□□□ -1.72
SNHG1-201ENST00000535076 HEATR5AQ86XA9 2040 aa4.28□□□□□ -1.73
SNHG1-201ENST00000535076 LOC107984640A0A0U1RRK4 108 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 LOC107986453A0A1B0GWG9 222 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 DAPL1A0PJW8 107 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 CGB1A6NKQ9 187 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 SLC17A2O00624 439 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 HSPB6O14558 160 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 MPDU1O75352 247 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 DPM2O94777 84 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 LGALS1P09382 135 aaKnown RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF688P0C7X2 276 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 CRYGAP11844 174 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 MDKP21741 143 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 GATA2P23769 480 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 CD40P25942 277 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 PSMB8P28062 276 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 CTGFP29279 349 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 CRYBA2P53672 197 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 HERVK_113P63121 156 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 CCL20P78556 96 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF117Q03924 483 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF90Q03938 601 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 WFDC2Q14508 124 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 ETDBQ3ZM63 59 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF672Q499Z4 452 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 GGTA1PQ4G0N0 100 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 NMSQ5H8A3 153 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 KHDC1LQ5JSQ8 128 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 Q5XG85 94 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 PARM1Q6UWI2 310 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 TMEM136Q6ZRR5 245 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 FAM231DQ6ZW35 169 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 BCDIN3DQ7Z5W3 292 aaKnown RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF584Q8IVC4 421 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 BCL6BQ8N143 479 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 GAPTQ8N292 157 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 CLDN19Q8N6F1 224 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 TEX45Q8NA69 505 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 MYOZ3Q8TDC0 251 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 FGF14Q92915 247 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 ELSPBP1Q96BH3 223 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms